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通过对褐藻(海带目,褐藻门)日本裙带菜的全基因组研究探索对多种环境胁迫的核心响应机制。

Exploring Core Response Mechanisms to Multiple Environmental Stressors Via A Genome-Wide Study in the Brown Alga Saccharina japonica (Laminariales, Phaeophyceae).

机构信息

Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, 266071, China.

Laboratory for Marine Fisheries and Aquaculture, Qingdao National Laboratory for Marine Science and Technology, Qingdao, 266200, China.

出版信息

J Phycol. 2021 Feb;57(1):345-354. doi: 10.1111/jpy.13108. Epub 2020 Dec 15.

Abstract

Saccharina japonica is an important large brown alga and a major component of productive beds on the northwest coast of the Pacific Ocean. Abiotic stress response mechanisms are receiving considerable attention because global climate change is increasing their abiotic stress levels. However, our knowledge of how S. japonica broadly responds to stress is limited. In this study, we investigated the S. japonica responsive genes underlying acclimation to diverse stressors of acidification, high light, high temperature, hypersalinity, and hyposalinity and identified 408 core genes constantly and differentially expressed in response to all stressors. Our results confirm that stressors had strong effects on genes participating in photosynthesis, amino acid metabolism, carbohydrate metabolism, halogen metabolism, and reactive oxygen species defense. These findings will improve our understanding of brown algal response mechanisms linked to environmental stress and provide a list of candidate genes for improving algal stress tolerance in light of environmental stress in future studies.

摘要

裙带菜是一种重要的大型褐藻,也是西北太平洋具有生产力的海床的主要组成部分。非生物胁迫响应机制受到了相当多的关注,因为全球气候变化正在增加它们的非生物胁迫水平。然而,我们对裙带菜如何广泛应对胁迫的了解是有限的。在这项研究中,我们调查了裙带菜响应基因,这些基因与酸化、高光、高温、高盐度和低盐度等不同胁迫因素的适应有关,并鉴定了 408 个核心基因,这些基因对所有胁迫因素的响应都是持续的和差异表达的。我们的结果证实,胁迫因素对参与光合作用、氨基酸代谢、碳水化合物代谢、卤代物代谢和活性氧防御的基因有很强的影响。这些发现将提高我们对与环境胁迫相关的褐藻响应机制的理解,并为未来研究中针对环境胁迫提高藻类胁迫耐受性提供候选基因列表。

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