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小型植物标本馆为县、地点和时间尺度提供独特的生物地理记录。

Small herbaria contribute unique biogeographic records to county, locality, and temporal scales.

机构信息

Department of Biological Sciences, Arkansas State University, State University, PO Box 599, AR, 72467, USA.

Sagehen Creek Field Station, University of California Berkeley, 11616 Sagehen Road, Truckee, CA, 96160, USA.

出版信息

Am J Bot. 2020 Nov;107(11):1577-1587. doi: 10.1002/ajb2.1563. Epub 2020 Nov 20.

Abstract

PREMISE

With digitization and data sharing initiatives underway over the last 15 years, an important need has been prioritizing specimens to digitize. Because duplicate specimens are shared among herbaria in exchange and gift programs, we investigated the extent to which unique biogeographic data are held in small herbaria vs. these data being redundant with those held by larger institutions. We evaluated the unique specimen contributions that small herbaria make to biogeographic understanding at county, locality, and temporal scales.

METHODS

We sampled herbarium specimens of 40 plant taxa from each of eight states of the United States of America in four broad status categories: extremely rare, very rare, common native, and introduced. We gathered geographic information from specimens held by large (≥100,000 specimens) and small (<100,000 specimens) herbaria. We built generalized linear mixed models to assess which features of the collections may best predict unique contributions of herbaria and used an Akaike information criterion-based information-theoretic approach for our model selection to choose the best model for each scale.

RESULTS

Small herbaria contributed unique specimens at all scales in proportion with their contribution of specimens to our data set. The best models for all scales were the full models that included the factors of species status and herbarium size when accounting for state as a random variable.

CONCLUSIONS

We demonstrated that small herbaria contribute unique information for research. It is clear that unique contributions cannot be predicted based on herbarium size alone. We must prioritize digitization and data sharing from herbaria of all sizes.

摘要

前提

在过去 15 年中,随着数字化和数据共享计划的进行,优先考虑要数字化的标本成为了一个重要需求。由于重复的标本在标本馆之间通过交换和赠送计划进行共享,我们研究了小型标本馆与大型机构所持有标本的独特生物地理数据的冗余程度。我们评估了小型标本馆在县、地点和时间尺度上对生物地理理解的独特标本贡献。

方法

我们从美国四个广泛的状态类别中的八个州的 40 种植物类群的每种植物中抽取了标本:极度稀有、非常稀有、常见本地和引入。我们从大型(≥100,000 个标本)和小型(<100,000 个标本)标本馆中收集了地理信息。我们构建了广义线性混合模型,以评估收藏的哪些特征可能最好地预测标本馆的独特贡献,并使用基于 Akaike 信息准则的信息论方法对我们的模型选择进行了选择,为每个尺度选择最佳模型。

结果

小型标本馆在所有尺度上都以与其对我们数据集的标本贡献成比例的方式做出了独特的标本贡献。所有尺度的最佳模型都是包含物种状态和标本馆大小因素的完整模型,同时考虑州作为随机变量。

结论

我们证明了小型标本馆为研究提供了独特的信息。显然,不能仅根据标本馆的规模来预测独特的贡献。我们必须优先考虑对所有规模的标本馆进行数字化和数据共享。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/248b/7756855/45b75a4e5584/AJB2-107-1577-g001.jpg

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