Zhang Wenhao, Qiu Wenlong
Savaid Medical School, University of Chinese Academy of Sciences, Beijing, China.
Qilu Hospital, Shandong University, Jinan, China.
Front Mol Biosci. 2020 Nov 6;7:212. doi: 10.3389/fmolb.2020.00212. eCollection 2020.
The deubiquitinating enzyme (DUB) OTUB1 can regulate the process of ubiquitination, but the influence of OTUB1 on immunity, apoptosis, autophagy, and the prognosis of digestive cancers requires further exploration.
OTUB1 expression was analyzed with the Oncomine and TIMER database. Kaplan-Meier plotter was used to calculate the association between OTUB1 and clinical prognosis. The regulation of OTUB1 on cancer immunocyte infiltration was determined by the TIMER database. The interaction between OTUB1 and immune genes, gene expression profiling (GEP), key genes of apoptosis and autophagy were analyzed via GEPIA. Protein-protein interaction (PPI), gene expression profiling (GEP), and functional pathway enrichment were also performed with the STRING and Pathway Common databases, respectively.
High OTUB1 expression was found in CHOL, LIHC, READ, ESCA, and COAD, which was significantly associated with the poorer OS of LIHC (HR = 2.07, 95% CI = 1.30-3.30, = 0.002), with modifications by sex, stage, grade, and mutant burden. OTUB1 can promote the recruitment of B cells, CD8 + T cells, macrophages in ESCA, B cells, and neutrophils in LIHC. We determined a significant interaction between OTUB1 and USP8, RNF128, LRIG1, UBB, UBC, STAM2, RNF41, EGFR, RPS27A, and HGS by PPI. This functional pathway indicates the regulatory role of OTUB1on immune, apoptosis, and autophagy through its interaction with TP53 and ATG.
OTUB1 performed as a molecular indicator of poor prognosis in digestive cancers, regulated the infiltration of tumor immunocytes, and exerted a significant influence on apoptosis and autophagy. OTUB1 is a potential antitumor target for digestive tumors.
去泛素化酶(DUB)OTUB1可调节泛素化过程,但OTUB1对免疫、凋亡、自噬及消化系癌症预后的影响尚需进一步探究。
利用Oncomine和TIMER数据库分析OTUB1表达。采用Kaplan-Meier绘图仪计算OTUB1与临床预后的关联。通过TIMER数据库确定OTUB1对癌症免疫细胞浸润的调节作用。经由GEPIA分析OTUB1与免疫基因、基因表达谱(GEP)、凋亡和自噬关键基因之间的相互作用。还分别使用STRING和Pathway Common数据库进行蛋白质-蛋白质相互作用(PPI)、基因表达谱(GEP)及功能通路富集分析。
在肝内胆管癌(CHOL)、肝癌(LIHC)、直肠癌(READ)、食管癌(ESCA)和结肠癌(COAD)中发现OTUB1高表达,这与LIHC患者较差的总生存期显著相关(风险比[HR]=2.07,95%置信区间[CI]=1.30 - 3.30,P = 0.002),且受性别、分期、分级和突变负荷影响。OTUB1可促进ESCA中B细胞、CD8 + T细胞、巨噬细胞以及LIHC中B细胞和中性粒细胞的募集。通过PPI分析,我们确定OTUB1与泛素特异性蛋白酶8(USP8)、环指蛋白128(RNF128)、富含亮氨酸重复免疫球蛋白样结构域1(LRIG1)、泛素B(UBB)、泛素C(UBC)、信号转导和转录激活因子结合分子2(STAM2)、环指蛋白41(RNF41)、表皮生长因子受体(EGFR)、核糖体蛋白S27A(RPS27A)和肝细胞生长因子调节蛋白(HGS)之间存在显著相互作用。该功能通路表明OTUB1通过与TP53和自噬相关基因(ATG)相互作用对免疫、凋亡和自噬发挥调节作用。
OTUB1是消化系癌症预后不良的分子指标,可调节肿瘤免疫细胞浸润,并对凋亡和自噬产生显著影响。OTUB1是消化系肿瘤潜在的抗肿瘤靶点。