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了解细胞与基质相互作用的全貌:高通量生物材料平台与系统水平测量

Getting the big picture of cell-matrix interactions: High-throughput biomaterial platforms and systems-level measurements.

作者信息

Lei Ruoxing, Kumar Sanjay

机构信息

Department of Chemistry, University of California, Berkeley, CA, 94720.

Department of Bioengineering, University of California, Berkeley, CA, 94720.

出版信息

Curr Opin Solid State Mater Sci. 2020 Dec;24(6). doi: 10.1016/j.cossms.2020.100871. Epub 2020 Nov 10.

Abstract

Living cells interact with the extracellular matrix (ECM) in a complex and reciprocal manner. Much has been learned over the past few decades about cell-ECM interactions from targeted studies in which a specific matrix parameter (e.g. stiffness, adhesivity) has been varied across a few discrete values, or in which the level or activity of a protein is controlled in an isolated fashion. As the field moves forward, there is growing interest in addressing cell-matrix interactions from a perspective, which has spurred a new generation of matrix platforms capable of interrogating multiple ECM inputs in a combinatorial and parallelized fashion. Efforts are also actively underway to integrate specialized, synthetic ECM platforms with global measures of cell behaviors, including at the transcriptomic, proteomic and epigenomic levels. Here we review recent advances in both areas. We describe how new combinatorial ECM technologies are revealing unexpected crosstalk and nonlinearity in the relationship between cell phenotype and matrix properties. Similarly, efforts to integrate "omics" measurements with synthetic ECM platforms are illuminating how ECM properties can control cell biology in surprising and functionally important ways. We expect that advances in both areas will deepen the field's understanding of cell-ECM interactions and offer valuable insight into the design of biomaterials for specific biomedical applications.

摘要

活细胞与细胞外基质(ECM)以复杂且相互的方式相互作用。在过去几十年中,通过针对性研究,我们对细胞与ECM的相互作用有了很多了解。在这些研究中,特定的基质参数(如硬度、粘附性)在几个离散值范围内变化,或者蛋白质的水平或活性以孤立的方式受到控制。随着该领域的不断发展,人们越来越有兴趣从一个新的角度来研究细胞与基质的相互作用,这催生了新一代能够以组合和平行方式探究多种ECM输入的基质平台。同时,也在积极努力将专门的合成ECM平台与细胞行为的全局测量方法相结合,包括转录组学、蛋白质组学和表观基因组学水平。在此,我们综述这两个领域的最新进展。我们描述了新的组合式ECM技术如何揭示细胞表型与基质特性之间关系中意想不到的串扰和非线性。同样,将“组学”测量与合成ECM平台相结合的努力正在阐明ECM特性如何以令人惊讶且功能重要的方式控制细胞生物学。我们预计这两个领域的进展将加深该领域对细胞与ECM相互作用的理解,并为特定生物医学应用的生物材料设计提供有价值的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0410/7685248/996b3c7088ce/nihms-1645414-f0001.jpg

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