Qarun Petroleum Company, 1 Str., No 315, New Maadi, Cairo, 11728, Egypt.
Department of Green Chemistry, National Research Center, Dokki, Giza, 12622, Egypt.
J Mol Model. 2020 Nov 26;26(12):354. doi: 10.1007/s00894-020-04602-2.
In this study, we elucidated the formation of hydrogen bond between adrenaline (AD) and hydrogen sulfide utilizing computational studies. Six potential complexes were studied including geometrical parameters, energy, vibrational frequency, topological analysis, natural bond orbital (NBO), quantum theory of atoms in molecules (QTAIM), and NMR analysis. Moreover, these calculations were examined through DFT/ωB97XD/6-311G++(d,p) level. It was found that there are no indication on formation on hydrogen bonding between the two catecholic OHs where the one formed between the amino group and the hydroxyl oxygen atom of adrenaline monomer was broken in AS to form two new interactions namely SHN and OHS, while it retained in other complexes. Furthermore, the bond became stronger due to cooperativity in AS and AS, for the presence of withdrawing effect of the phenyl ring, the H-bonds formed with the side chain oxygen atom. The adrenaline and HS interaction was experimentally examined via FT-IR spectrometry and thin layer chromatography for confirmation of our theoretical study. Graphical abstract.
在这项研究中,我们利用计算研究阐明了肾上腺素(AD)与硫化氢之间氢键的形成。研究了六个潜在的配合物,包括几何参数、能量、振动频率、拓扑分析、自然键轨道(NBO)、原子分子量子理论(QTAIM)和 NMR 分析。此外,这些计算通过 DFT/ωB97XD/6-311G++(d,p) 水平进行了检验。结果发现,在两个儿茶酚 OH 之间没有形成氢键的迹象,其中在 AS 中形成的氨基和肾上腺素单体羟基氧原子之间的氢键被打破,形成了两个新的相互作用,即 SHN 和 OHS,而在其他配合物中则保留了氢键。此外,由于协同作用,键变得更强,对于芳环的吸电子效应,氢键与侧链氧原子形成。通过傅里叶变换红外光谱和薄层层析实验对肾上腺素和 HS 的相互作用进行了实验研究,以证实我们的理论研究。