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从一名患有慢性阻塞性肺疾病症状的59岁男性中分离出的新细菌——马赛-Q3615菌株的基因组草图及描述。

Draft genome and description of strain Marseille-Q3615 sp. nov., a new bacterium isolated from a 59-year-old man with chronic obstructive pulmonary disease symptoms.

作者信息

Boxberger M, Antezack A, Magnien S, Cassir N, La Scola B

机构信息

Aix-Marseille Université, IRD, APHM, MEPHI, Marseille, France.

IHU Méditerranée Infection, Marseille, France.

出版信息

New Microbes New Infect. 2020 Oct 28;38:100801. doi: 10.1016/j.nmni.2020.100801. eCollection 2020 Nov.

Abstract

In 2020, as part of a diagnosis attempt at IHU Méditerranée Infection in Marseille (France), a blood specimen was obtained from a 59-year-old man with chronic obstructive pulmonary disease symptoms, from which we isolated the new bacterial strain Marseille-Q3615. Matrix-assisted desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) failed to identify this isolate. Analysis of the 16S ribosomal RNA gene and genome-to-Genome comparison suggested that this taxon belongs to a novel bacterial species within the family in the phylum . We describe the main phenotypic characteristics, genome sequence and annotation of strain Marseille-Q3615, a new member of the genus, which we propose as the type strain.

摘要

2020年,作为法国马赛地中海感染研究所(IHU)诊断尝试的一部分,从一名患有慢性阻塞性肺疾病症状的59岁男子身上采集了一份血液样本,从中我们分离出了新的细菌菌株马赛-Q3615。基质辅助激光解吸电离飞行时间质谱(MALDI-TOF MS)未能鉴定出该分离株。对16S核糖体RNA基因的分析和全基因组比较表明,该分类单元属于门内科中的一个新细菌物种。我们描述了菌株马赛-Q3615的主要表型特征、基因组序列和注释,它是属的一个新成员,我们提议将其作为模式菌株。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4356/7683265/12b315c44ca4/gr1.jpg

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