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遗传多态性对安第斯高地人群血红蛋白浓度的影响。

Effect of Genetic Polymorphisms on Hemoglobin Concentration in Andean Highlanders.

机构信息

Department of Human Functional Genomics, Advanced Science Research Promotion Center, Mie University, Tsu, Mie 514-8507, Japan.

Department of Public Health, Nagasaki University Graduate School of Biomedical Sciences, 1-12-4 Sakamoto, Nagasaki 852-8523, Japan.

出版信息

Biomed Res Int. 2020 Nov 15;2020:3436581. doi: 10.1155/2020/3436581. eCollection 2020.

Abstract

The physiological characteristics of Andean natives living at high altitudes have been investigated extensively, with many studies reporting that Andean highlanders have a higher hemoglobin (Hb) concentration than other highlander populations. It has previously been reported that positive natural selection has acted independently on the egl-9 family hypoxia inducible factor 1 () gene in Tibetan and Andean highlanders and is related to Hb concentration in Tibetans. However, no study has yet revealed the genetic determinants of Hb concentration in Andeans even though several single-nucleotide polymorphisms (SNPs) in have previously been examined. Therefore, we explored the relationship between hematological measurements and tag SNPs designed to cover the whole genomic region in Andean highlanders living in Bolivia. Our findings indicated that haplotype frequencies estimated from the SNPs were significantly correlated with Hb concentration in the Bolivian highlanders. Moreover, we found that an Andean-dominant haplotype related to high Hb level may have expanded rapidly in ancestral Andean highlander populations. Analysis of genotype data in an ~436.3 kb genomic region containing using public databases indicated that the population structure based on genetic markers in Andean highlanders was largely different from that in other human populations. This finding may be related to an intrinsic or adaptive physiological characteristic of Andean highlanders. In conclusion, the high Hb concentrations in Andean highlanders can be partly characterized by genetic variants.

摘要

已经广泛研究了生活在高海拔地区的安第斯原住民的生理特征,许多研究报告称,安第斯高地居民的血红蛋白(Hb)浓度高于其他高地居民。先前有报道称,正选择独立作用于藏人和安第斯高地居民的 egl-9 家族缺氧诱导因子 1(HIF1)基因,与藏族人的 Hb 浓度有关。然而,尽管先前已经检查了 HIF1 中的几个单核苷酸多态性(SNP),但尚未揭示安第斯人 Hb 浓度的遗传决定因素。因此,我们探讨了玻利维亚安第斯高地居民的血液学测量值与旨在涵盖 HIF1 全基因组区域的标记 SNP 之间的关系。我们的研究结果表明,从 SNP 估计的单倍型频率与玻利维亚高原居民的 Hb 浓度显着相关。此外,我们发现与高 Hb 水平相关的安第斯优势单倍型可能在祖先安第斯高地人群中迅速扩张。使用公共数据库对包含 SNP 的约 436.3kb 基因组区域的基因型数据进行分析表明,基于 SNP 遗传标记的安第斯高地人群的群体结构与其他人群的群体结构有很大的不同。这一发现可能与安第斯高地居民内在或适应性的生理特征有关。总之,安第斯高地居民的高 Hb 浓度部分可以由 SNP 遗传变异来描述。

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