Agriculture Genetic Engineering Research Institute (AGERI), Cairo, Egypt.
Faculty of Agriculture Department of Genetics, Zagazig University, Zagazig, Egypt.
J Biomol Struct Dyn. 2022 Jul;40(10):4328-4340. doi: 10.1080/07391102.2020.1856186. Epub 2020 Dec 11.
The spread of fungal growth causes enormous economic, agricultural, and health problems for humans, such as sp., which produce aflatoxins. Thus, the inhibition of aflatoxin production became a precious target. In this research, the thioesterase (TE) domain from Polyketide synthase enzyme was selected to employ the docking, using AutoDock Vina, against 623 natural compounds from the South African natural compound database (SANCDB), to identify potential inhibitors that can selectively inhibit thioesterase domain. The top ten inhibitors components were pinocembrin, typhaphthalide, p-coumaroylputrescine, dilemmaone A, 9-angelylplatynecine, 2,4,6-octatrienal, 4,8-dichloro-3,7-dimethyl-, (2e,4z,6e)-, lilacinobiose, 1,3,7-octatriene, 5,6-dichloro-2-(dichloromethyl)-6-methyl-, [r*,s*-(e)]-(-)- (9ci), lilacinobiose, 1,3,7-octatriene, 5,6-dichloro-2-(dichloromethyl)-6-methyl-, [r*,s*-(e)]-(-)- (9ci), 1,3,7-octatriene, 1,5,6-trichloro-2-(dichloromethyl)-6-methyl-, [r*,s*-(z,e)] and 9-angelylhastanecine and that depending on the lowest binding energy, the best chemical interactions and the best drug-likeness. The results of those components gave successful inhibition with the thioesterase domain. So, they can be used for inhibition and controlling aflatoxin contamination of agriculture crop yields, specially, pinocembrin which gave promising results.Communicated by Ramaswamy H. Sarma.
真菌生长的扩散给人类带来了巨大的经济、农业和健康问题,例如产生黄曲霉毒素的 sp.。因此,抑制黄曲霉毒素的产生成为一个宝贵的目标。在这项研究中,选择了聚酮合酶酶的硫酯酶(TE)结构域,使用 AutoDock Vina 对接,针对来自南非天然化合物数据库(SANCDB)的 623 种天然化合物,以识别可能选择性抑制硫酯酶结构域的潜在抑制剂。排名前十的抑制剂成分是 pinocembrin、typhaphthalide、p-coumaroylputrescine、dilemmaone A、9-angelylplatynecine、2,4,6-octatrienal、4,8-dichloro-3,7-dimethyl-、(2e,4z,6e)-、lilacinobiose、1,3,7-octatriene、5,6-dichloro-2-(dichloromethyl)-6-methyl-、[r*,s*-(e)]-(-)- (9ci)、lilacinobiose、1,3,7-octatriene、5,6-dichloro-2-(dichloromethyl)-6-methyl-、[r*,s*-(e)]-(-)- (9ci)、1,3,7-octatriene、1,5,6-trichloro-2-(dichloromethyl)-6-methyl-、[r*,s*-(z,e)] 和 9-angelylhastanecine,根据最低结合能、最佳化学相互作用和最佳药物相似性,这些成分的结果表明对硫酯酶结构域具有成功的抑制作用。因此,它们可用于抑制和控制农业作物产量的黄曲霉毒素污染,特别是 pinocembrin,它给出了有希望的结果。由 Ramaswamy H. Sarma 交流。