• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

土壤微生物的空间尺度分布模式更为陡峭,这是由确定性组装过程塑造的。

Steeper spatial scaling patterns of subsoil microbiota are shaped by deterministic assembly process.

机构信息

CAS Key Laboratory for Environmental Biotechnology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences (CAS), Beijing, China.

College of Resources and Environment, University of Chinese Academy of Sciences, Beijing, China.

出版信息

Mol Ecol. 2021 Feb;30(4):1072-1085. doi: 10.1111/mec.15777. Epub 2020 Dec 26.

DOI:10.1111/mec.15777
PMID:33320382
Abstract

Although many studies have investigated the spatial scaling of microbial communities living in surface soils, very little is known about the patterns within deeper strata, nor is the mechanism behind them. Here, we systematically assessed spatial scaling of prokaryotic biodiversity within three different strata (Upper: 0-20 cm, Middle: 20-40 cm, and Substratum: 40-100 cm) in a typical grassland by examining both distance-decay (DDRs) and species-area relationships (SARs), taxonomically and phylogenetically, as well as community assembly processes. Each layer exhibited significant biogeographic patterns in both DDR and SAR (p < .05), with taxonomic turnover rates higher than phylogenetic ones. Specifically, the spatial turnover rates, β and z values, respectively, ranged from 0.016 ± 0.005 to 0.023 ± 0.005 and 0.065 ± 0.002 to 0.077 ± 0.004 across soil strata, and both increased with depth. Moreover, the prokaryotic community in grassland soils assembled mainly according to deterministic rather than stochastic mechanisms. By using normalized stochasticity ratio (NST) based on null model, the relative importance of deterministic ratios increased from 48.0 to 63.3% from Upper to Substratum, meanwhile a phylogenetic based method revealed average βNTI also increased with depth, from -5.29 to 19.5. Using variation partitioning and distance approaches, both geographic distance and soil properties were found to strongly affect biodiversity structure, the proportions increasing with depth, but spatial distance was always the main underlying factor. These indicated increasingly deterministic proportions in accelerating turnover rates for spatial assembly of prokaryotic biodiversity. Our study provided new insights on biogeography in different strata, revealing importance of assembly patterns and mechanisms of prokaryote communities in below-surface soils.

摘要

尽管许多研究已经调查了生活在表层土壤中的微生物群落的空间尺度,但对于更深层次的地层中的模式知之甚少,也不知道其背后的机制。在这里,我们通过检查距离衰减(DDR)和物种-面积关系(SAR),从分类和系统发育以及群落组装过程的角度,系统地评估了典型草原中三个不同地层(上层:0-20cm、中层:20-40cm 和底层:40-100cm)中原核生物多样性的空间尺度。每个层在 DDR 和 SAR 中都表现出显著的生物地理模式(p<0.05),分类周转率高于系统发育周转率。具体而言,空间周转率β和 z 值分别在 0.016±0.005 至 0.023±0.005 和 0.065±0.002 至 0.077±0.004 之间变化,且随深度增加而增加。此外,草原土壤中原核生物群落主要根据确定性而不是随机机制组装。通过使用基于 null 模型的归一化随机比(NST),确定性比的相对重要性从上层到底层从 48.0%增加到 63.3%,同时基于系统发育的方法表明平均βNTI 也随深度增加而增加,从-5.29 增加到 19.5。通过变异划分和距离方法,地理距离和土壤特性都被发现强烈影响生物多样性结构,比例随深度增加,但空间距离始终是主要的潜在因素。这表明,在加速原核生物生物多样性的空间组装中,确定性比例不断增加。我们的研究为不同地层的生物地理学提供了新的见解,揭示了组装模式和机制在地下土壤中原核生物群落中的重要性。

相似文献

1
Steeper spatial scaling patterns of subsoil microbiota are shaped by deterministic assembly process.土壤微生物的空间尺度分布模式更为陡峭,这是由确定性组装过程塑造的。
Mol Ecol. 2021 Feb;30(4):1072-1085. doi: 10.1111/mec.15777. Epub 2020 Dec 26.
2
Meadow degradation increases spatial turnover rates of the fungal community through both niche selection and dispersal limitation.草地退化通过生态位选择和扩散限制增加真菌群落的空间周转率。
Sci Total Environ. 2021 Dec 1;798:149362. doi: 10.1016/j.scitotenv.2021.149362. Epub 2021 Jul 31.
3
Spatial patterns and ecological drivers of soil nematode β-diversity in natural grasslands vary among vegetation types and trophic position.自然草地土壤线虫β多样性的空间格局和生态驱动因素因植被类型和营养位而异。
J Anim Ecol. 2021 May;90(5):1367-1378. doi: 10.1111/1365-2656.13461. Epub 2021 Mar 17.
4
Stochastic processes drive bacterial and fungal community assembly in sustainable intensive agricultural soils of Shanghai, China.随机过程驱动中国上海可持续集约化农业土壤中的细菌和真菌群落组装。
Sci Total Environ. 2021 Jul 15;778:146021. doi: 10.1016/j.scitotenv.2021.146021. Epub 2021 Feb 23.
5
Soil depth and geographic distance modulate bacterial β-diversity in deep soil profiles throughout the U.S. Corn Belt.土壤深度和地理距离在美国玉米带的深层土壤剖面中调节细菌β多样性。
Mol Ecol. 2023 Jul;32(13):3718-3732. doi: 10.1111/mec.16945. Epub 2023 Apr 11.
6
Relative Importance of Deterministic and Stochastic Processes on Soil Microbial Community Assembly in Temperate Grasslands.确定性和随机过程对温带草原土壤微生物群落组装的相对重要性
Microorganisms. 2021 Sep 10;9(9):1929. doi: 10.3390/microorganisms9091929.
7
Spatial scaling of forest soil microbial communities across a temperature gradient.森林土壤微生物群落沿温度梯度的空间尺度变化。
Environ Microbiol. 2018 Oct;20(10):3504-3513. doi: 10.1111/1462-2920.14303. Epub 2018 Sep 2.
8
Spatial distribution patterns across multiple microbial taxonomic groups.多个微生物分类群的空间分布模式。
Environ Res. 2023 Apr 15;223:115470. doi: 10.1016/j.envres.2023.115470. Epub 2023 Feb 10.
9
Spatial Variation in Soil Fungal Communities across Paddy Fields in Subtropical China.中国亚热带稻田土壤真菌群落的空间变异
mSystems. 2020 Jan 7;5(1):e00704-19. doi: 10.1128/mSystems.00704-19.
10
Aridity modulates biogeographic distribution and community assembly of cyanobacterial morphotypes in drylands.干旱调节了干旱地区蓝藻形态的生物地理分布和群落组装。
FEMS Microbiol Ecol. 2023 May 31;99(6). doi: 10.1093/femsec/fiad053.

引用本文的文献

1
Environmental Effects on Bacterial Community Assembly in Arid and Semi-Arid Grasslands.干旱和半干旱草原中环境对细菌群落组装的影响
Microorganisms. 2025 Aug 19;13(8):1934. doi: 10.3390/microorganisms13081934.
2
Altered precipitation and nighttime warming reshape the vertical distribution of soil microbial communities.降水变化和夜间变暖重塑了土壤微生物群落的垂直分布。
mSystems. 2025 May 20;10(5):e0124824. doi: 10.1128/msystems.01248-24. Epub 2025 Apr 8.
3
Ecological and evolutionary processes involved in shaping microbial habitat generalists and specialists in urban park ecosystems.
塑造城市公园生态系统中微生物生境广义适应者和特化者的生态和进化过程。
mSystems. 2024 Jun 18;9(6):e0046924. doi: 10.1128/msystems.00469-24. Epub 2024 May 20.
4
Microeukaryotic plankton community dynamics under ecological water replenishment: Insights from eDNA metabarcoding.生态补水条件下的微型真核浮游生物群落动态:基于环境DNA宏条形码技术的见解
Environ Sci Ecotechnol. 2024 Mar 7;20:100409. doi: 10.1016/j.ese.2024.100409. eCollection 2024 Jul.
5
Linking ecological niches to bacterial community structure and assembly in polluted urban aquatic ecosystems.将生态位与污染的城市水生生态系统中的细菌群落结构及组装相联系。
Front Microbiol. 2023 Dec 15;14:1288304. doi: 10.3389/fmicb.2023.1288304. eCollection 2023.
6
Depth dependence of climatic controls on soil microbial community activity and composition.气候控制对土壤微生物群落活性和组成的深度依赖性。
ISME Commun. 2021 Dec 15;1(1):78. doi: 10.1038/s43705-021-00081-5.
7
Soil microbial community assembly and stability are associated with potato ( L.) fitness under continuous cropping regime.在连作模式下,土壤微生物群落的组装与稳定性和马铃薯(茄属)的健康状况相关。
Front Plant Sci. 2022 Oct 3;13:1000045. doi: 10.3389/fpls.2022.1000045. eCollection 2022.
8
The divergent vertical pattern and assembly of soil bacterial and fungal communities in response to short-term warming in an alpine peatland.高山泥炭地土壤细菌和真菌群落对短期变暖的不同垂直模式及组装
Front Plant Sci. 2022 Sep 8;13:986034. doi: 10.3389/fpls.2022.986034. eCollection 2022.
9
Soil Layers Impact Soil Microbial Composition in the Ailao Mountains Subtropical Forest, Yunnan, China.土壤层对中国云南哀牢山亚热带森林土壤微生物组成的影响。
J Fungi (Basel). 2022 Sep 9;8(9):948. doi: 10.3390/jof8090948.
10
Homogeneous Selection and Dispersal Limitation Dominate the Effect of Soil Strata Under Warming Condition.均质选择和扩散限制主导变暖条件下土壤地层的影响。
Front Microbiol. 2022 Feb 24;13:801083. doi: 10.3389/fmicb.2022.801083. eCollection 2022.