Sagini Micah N, Klika Karel D, Orry Andrew, Zepp Michael, Mutiso Joshua, Berger Martin R
Toxicology and Chemotherapy Unit, German Cancer Research Center, Heidelberg, Germany.
Molecular Structure Analysis, German Cancer Research Center, Heidelberg, Germany.
Front Pharmacol. 2020 Nov 30;11:549804. doi: 10.3389/fphar.2020.549804. eCollection 2020.
Riproximin (Rpx) is a type II ribosome-inactivating protein with specific anti-proliferative activity. It was purified from Ximenia by affinity chromatography using a resin coupled with lactosyl residues. The same technique facilitated isolation of proteins with lectin-like properties from human Suit2-007 and rat ASML pancreatic cancer cells, which were termed lactosyl-sepharose binding proteins (LSBPs). The role of these proteins in cancer progression was investigated at mRNA level using chip array data of Suit2-007 and ASML cells re-isolated from nude rats. These data compared significant mRNA expression changes when relating primary (pancreas) and metastatic (liver) sites following orthotopic and intraportal implantation of Pancreatic Ductal Adenocarcinoma (PDAC) cells, respectively. The affinity of Rpx to 13 simple sugar structures was modeled by docking experiments, the ranking of which was principally confirmed by NMR-spectroscopy. In addition, Rpx and LSBPs were evaluated for anti-proliferative activity and their cellular uptake was assessed by fluorescence microscopy. From 13 monosaccharides evaluated, open-chain rhamnose, β-d-galactose, and α-l-galactopyranose showed the highest affinities for site 1 of Rpx's B-chain. NMR evaluation yielded a similar ranking, as galactose was among the best binders. Both, Rpx and LSBPs reduced cell proliferation , but their anti-proliferative effects were decreased by 15-20% in the presence of galactose. The program "Ingenuity Pathway Analysis" identified 2,415 genes showing significantly modulated mRNA expression following exposure of Suit2-007 cells to Rpx . These genes were then matched to those 1,639 genes, which were significantly modulated in the rat model when comparing primary and metastatic growth of Suit2-007 cells. In this overlap analysis, LSBP genes were considered separately. The potential suitability of Rpx for treating metastatic Suit2-007 PDAC cells was reflected by those genes, which were modulated by Rpx in a way opposite to that observed in cancer progression. Remarkably, these were 14% of all genes modulated during cancer progression, but 71% of the respective LSBP gene subgroup. Based on these findings, we predict that Rpx has the potential to treat PDAC metastasis by modulating genes involved in metastatic progression, especially by targeting LSBPs.
瑞普西明(Rpx)是一种具有特定抗增殖活性的II型核糖体失活蛋白。它是通过使用与乳糖基残基偶联的树脂进行亲和色谱法从西门木属植物中纯化得到的。同样的技术有助于从人Suit2 - 007和大鼠ASML胰腺癌细胞中分离出具有凝集素样特性的蛋白质,这些蛋白质被称为乳糖基琼脂糖结合蛋白(LSBPs)。利用从裸鼠中重新分离的Suit2 - 007和ASML细胞的芯片阵列数据,在mRNA水平上研究了这些蛋白质在癌症进展中的作用。这些数据分别比较了原位和门静脉内植入胰腺导管腺癌(PDAC)细胞后,原发部位(胰腺)和转移部位(肝脏)之间显著的mRNA表达变化。通过对接实验对Rpx与13种单糖结构的亲和力进行了建模,其排序主要通过核磁共振光谱法得到了证实。此外,评估了Rpx和LSBPs的抗增殖活性,并通过荧光显微镜评估了它们的细胞摄取情况。在评估的13种单糖中,开链鼠李糖、β - d - 半乳糖和α - l - 吡喃半乳糖对Rpx B链的位点1表现出最高的亲和力。核磁共振评估得出了类似的排序,因为半乳糖是最佳结合物之一。Rpx和LSBPs都能降低细胞增殖,但在半乳糖存在的情况下,它们的抗增殖作用降低了15 - 20%。“ Ingenuity Pathway Analysis”程序识别出2415个基因,这些基因在Suit2 - 007细胞暴露于Rpx后显示出显著调节的mRNA表达。然后将这些基因与在比较Suit2 - 007细胞的原发和转移生长时在大鼠模型中显著调节的1639个基因进行匹配。在这种重叠分析中,LSBP基因被单独考虑。Rpx对治疗转移性Suit2 - 007 PDAC细胞的潜在适用性通过那些被Rpx以与癌症进展中观察到的相反方式调节的基因得到了体现。值得注意的是,这些基因占癌症进展过程中所有调节基因的14%,但占相应LSBP基因亚组的71%。基于这些发现,我们预测Rpx有可能通过调节参与转移进展的基因,特别是通过靶向LSBPs来治疗PDAC转移。