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六聚体化和热稳定性在法尼基二磷酸甘油酸合酶的进化过程中很早就出现了。

Hexamerization and thermostability emerged very early during geranylgeranylglyceryl phosphate synthase evolution.

机构信息

Institute of Biophysics and Physical Biochemistry, Regensburg Center for Biochemistry, University of Regensburg, Regensburg, Germany.

出版信息

Protein Sci. 2021 Mar;30(3):583-596. doi: 10.1002/pro.4016. Epub 2021 Jan 11.

Abstract

A large number of archaea live in hyperthermophilic environments. In consequence, their proteins need to adopt to these harsh conditions, including the enzymes that catalyze the synthesis of their membrane ether lipids. The enzyme that catalyzes the formation of the first ether bond in these lipids, geranylgeranylglyceryl phosphate synthase (GGGPS), exists as a hexamer in many hyperthermophilic archaea, and a recent study suggested that hexamerization serves for a fine-tuning of the flexibility - stability trade-off under hyperthermophilic conditions. We have recently reconstructed the sequences of ancestral group II GGGPS enzymes and now present a detailed biochemical characterization of nine of these predecessors, which allowed us to trace back the evolution of hexameric GGGPS and to draw conclusions about the properties of extant GGGPS branches that were not accessible to experiments up to now. Almost all ancestral GGGPS proteins formed hexamers, which demonstrates that hexamerization is even more widespread among the GGGPS family than previously assumed. Furthermore, all experimentally studied ancestral proteins showed high thermostability. Our results indicate that the hexameric oligomerization state and thermostability were present very early during the evolution of group II GGGPS, while the fine tuning of the flexibility - stability trade-off developed very late, independent of the emergence of hexamerization.

摘要

大量的古菌生活在高温环境中。因此,它们的蛋白质需要适应这些恶劣的条件,包括催化它们的膜醚脂合成的酶。在许多嗜热古菌中,催化这些脂类中第一个醚键形成的酶是香叶基香叶基甘油磷酸合酶(GGGPS),它以六聚体的形式存在,最近的一项研究表明,六聚体化有助于在高温条件下微调灵活性-稳定性的权衡。我们最近重建了祖先进化枝 II GGGPS 酶的序列,现在对其中的 9 个进行了详细的生化特性分析,这使我们能够追溯六聚体 GGGPS 的进化,并对现存 GGGPS 分支的特性得出结论,这些结论迄今为止无法通过实验获得。几乎所有的祖先进化枝 GGGPS 蛋白都形成六聚体,这表明六聚体化在 GGGPS 家族中的分布比以前想象的更为广泛。此外,所有经过实验研究的祖先进化枝蛋白都表现出很高的热稳定性。我们的结果表明,在进化枝 II GGGPS 的早期就存在六聚体的寡聚化状态和热稳定性,而灵活性-稳定性的微调是在独立于六聚体化出现的很晚才发展起来的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/973c/7888582/3fb08416f8b4/PRO-30-583-g001.jpg

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