Rojas Molina Rossana, Liese Susanne, Carlson Andreas
Mechanics Division, Department of Mathematics, University of Oslo, Oslo, Norway.
Mechanics Division, Department of Mathematics, University of Oslo, Oslo, Norway.
Biophys J. 2021 Feb 2;120(3):424-431. doi: 10.1016/j.bpj.2020.12.014. Epub 2020 Dec 24.
Diffusion is a fundamental mechanism for protein distribution in cell membranes. These membranes often exhibit complex shapes, which range from shallow domes to elongated tubular or pearl-like structures. Shape complexity of the membrane influences the diffusive spreading of proteins and molecules. Despite the importance membrane geometry plays in these diffusive processes, it is challenging to establish the dependence between diffusion and membrane morphology. We solve the diffusion equation numerically on various static curved shapes representative for experimentally observed membrane shapes. Our results show that membrane necks become diffusion barriers. We determine the diffusive half-time, i.e., the time that is required to reduce the amount of protein in the budded region by one half, and find a quadratic relation between the diffusive half-time and the averaged mean curvature of the membrane shape, which we rationalize by a scaling law. Our findings thus help estimate the characteristic diffusive timescale based on the simple measure of membrane mean curvature.
扩散是蛋白质在细胞膜中分布的一种基本机制。这些膜通常呈现出复杂的形状,范围从浅穹顶到细长的管状或珍珠状结构。膜的形状复杂性会影响蛋白质和分子的扩散传播。尽管膜的几何形状在这些扩散过程中起着重要作用,但确定扩散与膜形态之间的依赖关系具有挑战性。我们在代表实验观察到的膜形状的各种静态弯曲形状上对扩散方程进行了数值求解。我们的结果表明,膜颈部成为扩散屏障。我们确定了扩散半衰期,即使出芽区域的蛋白质量减少一半所需的时间,并发现扩散半衰期与膜形状的平均平均曲率之间存在二次关系,我们通过标度定律对其进行了合理化解释。因此,我们的发现有助于基于膜平均曲率的简单测量来估计特征扩散时间尺度。