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豆科(豆科)植物叶绿体全基因组的特征分析。

Characterization of the complete chloroplast genome of (Leguminosae).

作者信息

Liu Yu, Huang Ping, Li Chang-Hong, Zang Feng-Qi, Zheng Yong-Qi

机构信息

State Key Laboratory of Tree Genetics and Breeding, Laboratory of Forest Silviculture and Tree Cultivation, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China.

出版信息

Mitochondrial DNA B Resour. 2019 Jul 12;4(2):2369-2370. doi: 10.1080/23802359.2019.1631131.

Abstract

is a Near Threatened species with high ecological and economic values. In this study, its chloroplast genome was assembled using Illumina pair-end sequencing dataset. The chloroplast genome has a quadripartite structure with 156,385 bp in length and contains a pair of 16,392 bp inverted repeat (IR) regions, which were separated by large single copy (LSC: 86,040 bp) region and small single copy (SSC: 37,561 bp) region. A total of 121 genes were annotated, including 77 protein-coding genes (PCGs), 36 tRNAs, and 8 rRNAs. The overall GC content was 36.1%. The phylogenetic analysis revealed that has close relationship to and . This complete chloroplast genome can be readily used for population genetic studies of .

摘要

是一种具有高生态和经济价值的近危物种。在本研究中,其叶绿体基因组是利用Illumina双端测序数据集组装而成的。叶绿体基因组具有四分体结构,长度为156,385 bp,包含一对16,392 bp的反向重复(IR)区域,它们被大单拷贝(LSC:86,040 bp)区域和小单拷贝(SSC:37,561 bp)区域隔开。总共注释了121个基因,包括77个蛋白质编码基因(PCG)、36个tRNA和8个rRNA。总体GC含量为36.1%。系统发育分析表明,与和有密切关系。这个完整的叶绿体基因组可很容易地用于的群体遗传学研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/01fb/7687653/99f9c365551a/TMDN_A_1631131_F0001_C.jpg

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