• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

越南一种易危豆科植物普兰的完整叶绿体基因组序列。

The complete chloroplast genome sequence of a vulnerable legume species prain in Vietnam.

作者信息

Lee Changyoung, Kim Yong-In, Kim Soo-Yong, Bach Tran The, Eum Sangmi, Thanh Nguyen Trung, Choi Sangho

机构信息

International Biological Material Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea.

Department of Botany, VNU University of Science, Hanoi, Vietnam.

出版信息

Mitochondrial DNA B Resour. 2019 Jul 17;4(2):2604-2605. doi: 10.1080/23802359.2019.1641441.

DOI:10.1080/23802359.2019.1641441
PMID:33365645
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7706621/
Abstract

is a critically vulnerable tree species that is distributed in Vietnam and Hainan Island of China. The complete chloroplast genome sequence of was characterized using Illumina pair-end sequencing. The cpDNA is 156,086 bp in length and contains a pair of 25,720 bp inverted repeats, one large single copy region of 85,761 bp, and one small single copy region of 18,885 bp. It contains 131 genes including 86 protein-coding genes, 36 tRNAs, eight rRNAs, and one pseudogene. The overall G + C content of the whole genome is 36.1%. Phylogenetic analysis based on 35 chloroplast genomes of Papilionoideae including (as an outgroup) indicates that all the species of the Dalbergioids formed a monophyletic clade and formed a sister relationship with the and group.

摘要

是一种极度濒危的树种,分布于越南和中国海南岛。利用Illumina双端测序对其完整叶绿体基因组序列进行了表征。叶绿体DNA长度为156,086 bp,包含一对25,720 bp的反向重复序列、一个85,761 bp的大单拷贝区域和一个18,885 bp的小单拷贝区域。它包含131个基因,包括86个蛋白质编码基因、36个tRNA、8个rRNA和一个假基因。全基因组的总体G + C含量为36.1%。基于包括(作为外类群)在内的35个蝶形花亚科叶绿体基因组的系统发育分析表明,黄檀类的所有物种形成一个单系分支,并且与和组形成姐妹关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c01c/7706621/4c4db3b34553/TMDN_A_1641441_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c01c/7706621/4c4db3b34553/TMDN_A_1641441_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c01c/7706621/4c4db3b34553/TMDN_A_1641441_F0001_C.jpg

相似文献

1
The complete chloroplast genome sequence of a vulnerable legume species prain in Vietnam.越南一种易危豆科植物普兰的完整叶绿体基因组序列。
Mitochondrial DNA B Resour. 2019 Jul 17;4(2):2604-2605. doi: 10.1080/23802359.2019.1641441.
2
Characterization of the complete chloroplast genome of Dalbergia congesta (Fabaceae), an endangered legume endemic to the Nilgiri Hills of Tamil Nadu, India.描述印度泰米尔纳德邦尼尔吉里丘陵特有的濒危豆科植物染料紫檀的完整叶绿体基因组。
Funct Integr Genomics. 2023 Apr 17;23(2):126. doi: 10.1007/s10142-023-01047-7.
3
The complete chloroplast genome sequence of .……的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2019 Dec 12;5(1):204-205. doi: 10.1080/23802359.2019.1698997.
4
Characterization of the complete chloroplast genome of (Leguminosae).豆科(豆科)植物叶绿体全基因组的特征分析。
Mitochondrial DNA B Resour. 2019 Jul 12;4(2):2369-2370. doi: 10.1080/23802359.2019.1631131.
5
The complete chloroplast genome sequence of .……的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2020 Jan 20;5(1):707-708. doi: 10.1080/23802359.2020.1714501.
6
The complete chloroplast genome of a critically endangered tree species, (Dipterocarpaceae).一种极度濒危树种(龙脑香科)的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2020 Oct 21;5(3):3575-3576. doi: 10.1080/23802359.2020.1829123.
7
The complete chloroplast genome of monotypic fern, (Thelypteridaceae).单型蕨类植物(金星蕨科)的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2018 Aug 17;3(2):868-869. doi: 10.1080/23802359.2018.1502632.
8
The complete chloroplast genome of (Sapotaceae), an endemic and endangered timber species in Hainan Island, China.中国海南岛特有濒危木材物种(山榄科)的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2021 Mar 15;6(3):755-757. doi: 10.1080/23802359.2021.1878954.
9
The complete chloroplast genome of a Korean endemic plant Y.I. Kim & Y.D. Kim (Saxifragaceae).一种韩国特有植物金英一和金英德(虎耳草科)的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2018 Mar 16;3(1):380-381. doi: 10.1080/23802359.2018.1450668.
10
The complete chloroplast genome sequence of Lindau.林道的完整叶绿体基因组序列。
Mitochondrial DNA B Resour. 2021 May 27;6(6):1786-1787. doi: 10.1080/23802359.2021.1934144.

本文引用的文献

1
New Records of Potent In-Vitro Antidiabetic Properties of Heartwood and the Bioactivity-Guided Isolation of Active Compounds.新记录:心材具有强大的体外抗糖尿病特性,以及基于生物活性的活性化合物的分离。
Molecules. 2018 Jun 29;23(7):1589. doi: 10.3390/molecules23071589.
2
IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies.IQ-TREE:一种用于估计最大似然系统发育树的快速且有效的随机算法。
Mol Biol Evol. 2015 Jan;32(1):268-74. doi: 10.1093/molbev/msu300. Epub 2014 Nov 3.
3
Ultrafast approximation for phylogenetic bootstrap.
快速近似的系统发育自举法。
Mol Biol Evol. 2013 May;30(5):1188-95. doi: 10.1093/molbev/mst024. Epub 2013 Feb 15.
4
MAFFT multiple sequence alignment software version 7: improvements in performance and usability.MAFFT 多序列比对软件版本 7:性能和易用性的改进。
Mol Biol Evol. 2013 Apr;30(4):772-80. doi: 10.1093/molbev/mst010. Epub 2013 Jan 16.