越南一种易危豆科植物普兰的完整叶绿体基因组序列。
The complete chloroplast genome sequence of a vulnerable legume species prain in Vietnam.
作者信息
Lee Changyoung, Kim Yong-In, Kim Soo-Yong, Bach Tran The, Eum Sangmi, Thanh Nguyen Trung, Choi Sangho
机构信息
International Biological Material Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea.
Department of Botany, VNU University of Science, Hanoi, Vietnam.
出版信息
Mitochondrial DNA B Resour. 2019 Jul 17;4(2):2604-2605. doi: 10.1080/23802359.2019.1641441.
is a critically vulnerable tree species that is distributed in Vietnam and Hainan Island of China. The complete chloroplast genome sequence of was characterized using Illumina pair-end sequencing. The cpDNA is 156,086 bp in length and contains a pair of 25,720 bp inverted repeats, one large single copy region of 85,761 bp, and one small single copy region of 18,885 bp. It contains 131 genes including 86 protein-coding genes, 36 tRNAs, eight rRNAs, and one pseudogene. The overall G + C content of the whole genome is 36.1%. Phylogenetic analysis based on 35 chloroplast genomes of Papilionoideae including (as an outgroup) indicates that all the species of the Dalbergioids formed a monophyletic clade and formed a sister relationship with the and group.
是一种极度濒危的树种，分布于越南和中国海南岛。利用Illumina双端测序对其完整叶绿体基因组序列进行了表征。叶绿体DNA长度为156,086 bp，包含一对25,720 bp的反向重复序列、一个85,761 bp的大单拷贝区域和一个18,885 bp的小单拷贝区域。它包含131个基因，包括86个蛋白质编码基因、36个tRNA、8个rRNA和一个假基因。全基因组的总体G + C含量为36.1%。基于包括（作为外类群）在内的35个蝶形花亚科叶绿体基因组的系统发育分析表明，黄檀类的所有物种形成一个单系分支，并且与和组形成姐妹关系。
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