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鸭跖草科(Commelinaceae)的叶绿体基因组序列。

The chloroplast genome sequence of (Commelinaceae).

作者信息

Cui Yong, Liang Rifan

机构信息

College of Horticulture and Landscape, Hunan Agricultural University, Changsha, China.

Department of Agriculture and Environmental Engineering, Guangxi Vocational and Technical College, Nanning, China.

出版信息

Mitochondrial DNA B Resour. 2019 Jul 18;4(2):2631-2632. doi: 10.1080/23802359.2019.1642153.

DOI:10.1080/23802359.2019.1642153
PMID:33365657
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7706858/
Abstract

is a hyperaccumulator on heavy metal with high drought resistance and endurance. Using Illumina next-generation sequencing data, its chloroplast genome is assembled and characterized. The complete chloroplast genome is 159,664 bp in length, consisting of a pair of inverted repeats (IRs) of 26,146 bp each, an 88,854 bp large single-copy (LSC) region and an 18,518 bp small single-copy (SSC) region. It has 137 genes in total, comprising 81 unique protein-coding genes, 32 unique tRNA genes, and 7 rRNA genes. Phylogenetic analysis based on the complete chloroplast genome sequences indicates that is sister to among species with available chloroplast genome sequences.

摘要

是一种对重金属具有高抗旱性和耐受性的超富集植物。利用Illumina下一代测序数据,对其叶绿体基因组进行了组装和特征分析。完整的叶绿体基因组长度为159,664 bp,由两个各为26,146 bp的反向重复序列(IRs)、一个88,854 bp的大单拷贝(LSC)区域和一个18,518 bp的小单拷贝(SSC)区域组成。它总共有137个基因,包括81个独特的蛋白质编码基因、32个独特的tRNA基因和7个rRNA基因。基于完整叶绿体基因组序列的系统发育分析表明,在所拥有叶绿体基因组序列的物种中, 与 是姐妹关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4e5c/7706858/4e2356431581/TMDN_A_1642153_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4e5c/7706858/4e2356431581/TMDN_A_1642153_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4e5c/7706858/4e2356431581/TMDN_A_1642153_F0001_C.jpg

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