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菊科(菊科植物)的完整叶绿体基因组。

The complete chloroplast genome of (Asteraceae).

作者信息

Qiao Zi-Peng, Chen Zhi-Xiang, Wang Qi-Zhi

机构信息

College of Chemical Engineering, Huaqiao University, Xiamen, PR China.

出版信息

Mitochondrial DNA B Resour. 2019 Oct 4;4(2):3342-3343. doi: 10.1080/23802359.2019.1673241.

DOI:10.1080/23802359.2019.1673241
PMID:33365984
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7707368/
Abstract

L. is an important Chinese medicinal plant. In this study, we reported the complete chloroplast genome of . . The chloroplast genome sequence is 151,309 bp in length and consisted of a large single copy (LSC) region (83,884 bp), a small single copy (SSC) region (17,771 bp), and two inverted repeats (IRs) (24,827 bp). It was composed of 126 genes and they were 81 protein-coding genes, 30 tRNA genes, 8 rRNA genes, and 7 pseudogene. Phylogenetic analysis with reported chloroplast genomes can not only show that has a close genetic relationship with and , but also provide new evidence for the identification of and .

摘要

L.是一种重要的中国药用植物。在本研究中,我们报道了……的完整叶绿体基因组。叶绿体基因组序列长度为151,309 bp,由一个大单拷贝(LSC)区域(83,884 bp)、一个小单拷贝(SSC)区域(17,771 bp)和两个反向重复序列(IRs)(24,827 bp)组成。它由126个基因组成,其中有81个蛋白质编码基因、30个tRNA基因、8个rRNA基因和7个假基因。与已报道的叶绿体基因组进行系统发育分析,不仅可以表明……与……和……有密切的遗传关系,还为……和……的鉴定提供了新的证据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5fb2/7707368/5acc9ad7e3c8/TMDN_A_1673241_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5fb2/7707368/5acc9ad7e3c8/TMDN_A_1673241_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5fb2/7707368/5acc9ad7e3c8/TMDN_A_1673241_F0001_B.jpg

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本文引用的文献

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NOVOPlasty: de novo assembly of organelle genomes from whole genome data.NOVOPlasty:从头组装细胞器基因组的全基因组数据。
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MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.MEGA7:适用于更大数据集的分子进化遗传学分析版本7.0
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Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data.
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