中国特有的珍稀濒危物种（菊科）的完整叶绿体基因组序列
Complete chloroplast genome sequence of (Asteraceae), a rare and vulnerable species endemic to China.
作者信息
Shi Yancai, Zhang Ying, Liu Bingbing
机构信息
Guangxi Institute of Botany, Guangxi Zhuang Autonomous Region and Chinese Academy of Sciences, Guilin, China.
Institute of Loess Plateau, Shanxi University, Taiyuan, Shanxi, China.
出版信息
Mitochondrial DNA B Resour. 2019 Oct 23;4(2):3719-3720. doi: 10.1080/23802359.2019.1680323.
(Asteraceae) is a rare and vulnerable species endemic to China. Here, we report and characterize the complete chloroplast genome sequence of based on Illumina paired-end sequencing data. The complete plastid genome was 152,629 bp in length, which contained two inverted repeats (IRs) of 24,954 bp separated by a large single-copy (LSC) and a small single-copy (SSC) of 84,427 bp and 18,294 bp, respectively. The cpDNA contains 131 genes, comprising 85 protein-coding genes, 37 tRNA genes, 8 rRNA genes and one processed pseudogene. The overall GC content of the plastome is 37.3%. The phylogenetic analysis of 17 selected chloroplast genomes demonstrated that was close to congeneric species .
（菊科）是中国特有的珍稀濒危物种。在此，我们基于Illumina双端测序数据报道并描述了其完整的叶绿体基因组序列。完整的质体基因组长度为152,629 bp，包含两个24,954 bp的反向重复序列（IRs），分别被84,427 bp的大单拷贝（LSC）和18,294 bp的小单拷贝（SSC）隔开。叶绿体DNA包含131个基因，包括85个蛋白质编码基因、37个tRNA基因、8个rRNA基因和一个加工后的假基因。质体基因组的总体GC含量为37.3%。对17个选定叶绿体基因组的系统发育分析表明，与同属物种关系密切。
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