来自中国青藏高原的一种药用植物川西獐牙菜（龙胆科）的完整叶绿体基因组。
The complete chloroplast genome of a medical herb, D.Don (Gentianaceae), from Qinghai-Tibet Plateau in China.
作者信息
Liu Likuan, Li Jinping, Wang Hongyu, Wei Zhen, Zuo Wenming, Zeng Yang
机构信息
The Key Laboratory of Qinghai Province on Plant and Animal Resources in Tibetan Plateau, College of Biological Science, Qinghai Normal University, Xining, Qinghai, China.
School of Life Sciences, Zhengzhou University, Zhengzhou, Henan, China.
出版信息
Mitochondrial DNA B Resour. 2019 Oct 4;4(2):3381-3382. doi: 10.1080/23802359.2019.1674202.
D.Don (Gentianaceae) is one of the genuine medicinal species in Qinghai-Tibet Plateau, China. Here we report the first chloroplast (cp) genome of using Illumina HiSeq X Ten platform. The length of its complete cp genome is 153,341 bp, containing four sub-regions; a large single-copy region (LSC) of 82,811 bp and a small single-copy region (SSC) of 18,278 bp, which are separated by a pair of inverted repeat regions (IRs) of 26,126bp each. The complete cp genome of contains 129 genes, including 84 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content of the cp genome is 38.1%. The phylogenetic analysis, based on 15 cp genomes, suggested that is closely related to (L.) Cornaz and species.
川西獐牙菜（龙胆科）是中国青藏高原的地道药材之一。在此，我们报道了利用Illumina HiSeq X Ten平台首次获得的川西獐牙菜叶绿体（cp）基因组。其完整cp基因组长度为153,341 bp，包含四个亚区；一个82,811 bp的大单拷贝区（LSC）和一个18,278 bp的小单拷贝区（SSC），它们被两个各为26,126 bp的反向重复区（IR）隔开。川西獐牙菜的完整cp基因组包含129个基因，包括84个蛋白质编码基因、37个tRNA基因和8个rRNA基因。cp基因组的总体GC含量为38.1%。基于15个cp基因组的系统发育分析表明，川西獐牙菜与（L.）Cornaz的獐牙菜属植物和其他獐牙菜属物种密切相关。
Zotero 插件