• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

来自中国青藏高原的一种药用草本植物椭圆叶花锚(龙胆科)的完整叶绿体基因组。

The complete chloroplast genome of a medical herb, (Hook. f.) Ma (Gentianaceae), from Qinghai-Tibet Plateau in China.

作者信息

Wang Hongyu, Li Jinping, Zeng Yang, Zhang Ruifeng, Zhang Junyan, Liu Likuan

机构信息

The College of Biological Science, Qinghai Normal University, Xining, China.

Academy of Plateau Science and Sustainability, Xining, China.

出版信息

Mitochondrial DNA B Resour. 2022 Aug 12;7(8):1477-1478. doi: 10.1080/23802359.2021.1915198. eCollection 2022.

DOI:10.1080/23802359.2021.1915198
PMID:35979391
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9377260/
Abstract

(Hook. f.) Ma (Gentianaceae) is one of the genuine medicinal materials in Qinghai-Tibet Plateau, China. Here we report the first chloroplast (cp) genome of using Illumina NovaSeq 6000 platform. The length of its complete cp genome is 151,568 bp, containing four sub-regions; a large single copy region (LSC) of 82,834 bp and a small single copy region (SSC) of 17,928 bp are separated by a pair of inverted repeat regions (IRs) of 25,403bp. The complete cp genome of contains 130 genes, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content of the cp genome is 37.8%. The phylogenetic analysis, based on 23 cp genomes, suggested that is closely related to (H. Smith) Ma and species.

摘要

(胡黄连属)藏胡黄连(龙胆科)是中国青藏高原的地道药材之一。在此,我们报道了利用Illumina NovaSeq 6000平台首次获得的藏胡黄连叶绿体(cp)基因组。其完整cp基因组长度为151,568 bp,包含四个亚区;一个82,834 bp的大单拷贝区(LSC)和一个17,928 bp的小单拷贝区(SSC)被一对25,403 bp的反向重复区(IR)隔开。藏胡黄连的完整cp基因组包含130个基因,包括85个蛋白质编码基因、37个tRNA基因和8个rRNA基因。cp基因组的总体GC含量为37.8%。基于23个cp基因组的系统发育分析表明,藏胡黄连与(川西)胡黄连(H. Smith)Ma及其他物种密切相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c48c/9377260/23e0da99fd12/TMDN_A_1915198_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c48c/9377260/23e0da99fd12/TMDN_A_1915198_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c48c/9377260/23e0da99fd12/TMDN_A_1915198_F0001_B.jpg

相似文献

1
The complete chloroplast genome of a medical herb, (Hook. f.) Ma (Gentianaceae), from Qinghai-Tibet Plateau in China.来自中国青藏高原的一种药用草本植物椭圆叶花锚(龙胆科)的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2022 Aug 12;7(8):1477-1478. doi: 10.1080/23802359.2021.1915198. eCollection 2022.
2
The complete chloroplast genome of a medical herb, D.Don (Gentianaceae), from Qinghai-Tibet Plateau in China.来自中国青藏高原的一种药用植物川西獐牙菜(龙胆科)的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2019 Oct 4;4(2):3381-3382. doi: 10.1080/23802359.2019.1674202.
3
The complete chloroplast genome of a medical herb, (Polygonaceae), from Qinghai-Tibet Plateau in China.来自中国青藏高原的一种药用草本植物(蓼科)的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2022 Jan 18;7(1):204-205. doi: 10.1080/23802359.2021.2002205. eCollection 2022.
4
The complete chloroplast genome of a medical herb, Fisch. (Rosaceae), from Qinghai-Tibet Plateau in China.来自中国青藏高原的一种药用草本植物,费氏唐棣(蔷薇科)的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2021 Feb 8;6(2):349-350. doi: 10.1080/23802359.2020.1866447.
5
The complete chloroplast genome sequence of (Harry Sm.) Ma (Gentianaceae) and phylogenetic analysis.(哈里·斯姆)马(龙胆科)的叶绿体全基因组序列及系统发育分析
Mitochondrial DNA B Resour. 2021 Jul 9;6(8):2297-2298. doi: 10.1080/23802359.2021.1947910. eCollection 2021.
6
The complete chloroplast genome of Tibetan medicine .藏药的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2020 Jan 20;5(1):705-706. doi: 10.1080/23802359.2020.1714494.
7
Complete chloroplast genome of and comparative analysis with related species from Gentianaceae.与玄参科相关物种的完整叶绿体基因组比较分析。
Genome. 2022 Jul 1;65(7):363-375. doi: 10.1139/gen-2021-0080. Epub 2022 May 7.
8
The complete nucleotide sequence of chloroplast genome of (Gentianaceae), an endemic medicinal herb in China.中国特有药用植物秦艽(龙胆科)叶绿体基因组的全核苷酸序列。
Mitochondrial DNA B Resour. 2019 Jul 16;4(2):2596-2597. doi: 10.1080/23802359.2019.1641442.
9
The Complete Chloroplast Genome Sequence of the Medicinal Plant Swertia mussotii Using the PacBio RS II Platform.利用PacBio RS II平台测定药用植物川西獐牙菜的叶绿体全基因组序列
Molecules. 2016 Aug 9;21(8):1029. doi: 10.3390/molecules21081029.
10
Comparative and phylogenetic analyses of Swertia L. (Gentianaceae) medicinal plants (from Qinghai, China) based on complete chloroplast genomes.基于完整叶绿体基因组对中国青海龙胆科獐牙菜属药用植物的比较分析和系统发育分析
Genet Mol Biol. 2021 Dec 13;45(1):e20210092. doi: 10.1590/1678-4685-GMB-2021-0092. eCollection 2021.

本文引用的文献

1
NOVOPlasty: de novo assembly of organelle genomes from whole genome data.NOVOPlasty:从头组装细胞器基因组的全基因组数据。
Nucleic Acids Res. 2017 Feb 28;45(4):e18. doi: 10.1093/nar/gkw955.
2
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.MEGA7:适用于更大数据集的分子进化遗传学分析版本7.0
Mol Biol Evol. 2016 Jul;33(7):1870-4. doi: 10.1093/molbev/msw054. Epub 2016 Mar 22.
3
MAFFT multiple sequence alignment software version 7: improvements in performance and usability.MAFFT 多序列比对软件版本 7:性能和易用性的改进。
Mol Biol Evol. 2013 Apr;30(4):772-80. doi: 10.1093/molbev/mst010. Epub 2013 Jan 16.
4
[General survey on medicinal plants of the Gentianaceae family in China].[中国龙胆科药用植物概况]
Zhong Yao Tong Bao. 1986 Nov;11(11):3-7.