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(伞形科)的完整质体基因组。

The complete plastome of (Apiaceae).

作者信息

Li Yingshuo, Geng Maolin, Xu Zenglai, Wang Qiong, Li Lingli, Xu Ming, Li Mimi

机构信息

Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, PR China.

The Jiangsu Provincial Platform for Conservation and Utilization of Agricultural Germplasm, Nanjing, PR China.

出版信息

Mitochondrial DNA B Resour. 2019 Oct 16;4(2):3612-3613. doi: 10.1080/23802359.2019.1676180.

DOI:10.1080/23802359.2019.1676180
PMID:33366108
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7707286/
Abstract

is an important traditional herbal medicine unique to China. The complete chloroplast genome of was generated here using high-throughput sequencing. The plastome was 147,197 bp in size, which consisted of a pair of inverted repeats (IRs; 18,713 bp), a large single copy (LSC; 92,161 bp) and a small single copy (SSC; 17,610 bp). The GC content of the plastome was 37.6%, with 44.5%, 36.0%, and 31.1% in IRs, LSC, and SSC, respectively. A total of 128 genes were annotated, including 84 protein-coding genes, 35 tRNAs, eight rRNAs, and one pseudogene (Ψ1). The phylogenomic analysis indicated that formed a monophyletic clade with .

摘要

是中国特有的重要传统草药。在此利用高通量测序生成了其完整的叶绿体基因组。该质体基因组大小为147,197 bp,由一对反向重复序列(IRs;18,713 bp)、一个大单拷贝(LSC;92,161 bp)和一个小单拷贝(SSC;17,610 bp)组成。质体基因组的GC含量为37.6%,其中IRs、LSC和SSC中的GC含量分别为44.5%、36.0%和31.1%。总共注释了128个基因,包括84个蛋白质编码基因、35个tRNA、8个rRNA和1个假基因(Ψ1)。系统发育基因组分析表明,与形成了一个单系分支。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9266/7707286/f3dd1d5a6830/TMDN_A_1676180_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9266/7707286/f3dd1d5a6830/TMDN_A_1676180_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9266/7707286/f3dd1d5a6830/TMDN_A_1676180_F0001_C.jpg

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本文引用的文献

1
GeSeq - versatile and accurate annotation of organelle genomes.GeSeq - 细胞器基因组的多功能和准确注释。
Nucleic Acids Res. 2017 Jul 3;45(W1):W6-W11. doi: 10.1093/nar/gkx391.
2
NOVOPlasty: de novo assembly of organelle genomes from whole genome data.NOVOPlasty:从头组装细胞器基因组的全基因组数据。
Nucleic Acids Res. 2017 Feb 28;45(4):e18. doi: 10.1093/nar/gkw955.
3
Plastid Genome of Seseli montanum: Complete Sequence and Comparison with Plastomes of Other Members of the Apiaceae Family.山地邪蒿质体基因组:完整序列及与伞形科其他成员质体基因组的比较
Front Plant Sci. 2022 Oct 24;13:1011001. doi: 10.3389/fpls.2022.1011001. eCollection 2022.
4
The first complete chloroplast genome of  de Boiss.: genome features, comparative analysis, and phylogenetic relationships.德布瓦氏(de Boiss.)的首个完整叶绿体基因组:基因组特征、比较分析及系统发育关系。
Physiol Mol Biol Plants. 2022 Feb;28(2):439-454. doi: 10.1007/s12298-022-01154-y. Epub 2022 Mar 4.
5
The complete plastomes of seven Peucedanum plants: comparative and phylogenetic analyses for the Peucedanum genus.七种草本植物的完整质体基因组:对苍术属植物的比较和系统发育分析。
BMC Plant Biol. 2022 Mar 7;22(1):101. doi: 10.1186/s12870-022-03488-x.
Biochemistry (Mosc). 2016 Sep;81(9):981-5. doi: 10.1134/S0006297916090078.
4
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.RAxML 版本 8:用于系统发育分析和大型系统发育后分析的工具。
Bioinformatics. 2014 May 1;30(9):1312-3. doi: 10.1093/bioinformatics/btu033. Epub 2014 Jan 21.
5
MAFFT multiple sequence alignment software version 7: improvements in performance and usability.MAFFT 多序列比对软件版本 7:性能和易用性的改进。
Mol Biol Evol. 2013 Apr;30(4):772-80. doi: 10.1093/molbev/mst010. Epub 2013 Jan 16.