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(拉马克)阿舍尔氏全叶绿体基因组

The complete chloroplast genome of (Lam.) Aschers.

作者信息

Dou Jian, Wang Hongjiang, Li Mimi, Huang Shengnan, Tong Haiying

机构信息

Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, China.

The Jiangsu Provincial Platform for Conservation and Utilization of Agricultural Germplasm, Nanjing, China.

出版信息

Mitochondrial DNA B Resour. 2020 Sep 22;5(3):3402-3403. doi: 10.1080/23802359.2020.1823266.

DOI:10.1080/23802359.2020.1823266
PMID:33458185
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7782341/
Abstract

is an important ornamental and horticultural plant endemic to China. In this study, we generated complete chloroplast genome of using high-throughput sequencing. The complete chloroplast sequence is a circular molecule of 157,091 bp in size, consisting of a large single copy (LSC, 86,061 bp) and a small single copy (SSC; 18,282 bp) separated by a pair of inverted repeats (IRs; 26,374 bp), The total GC content is 37.8%, with 35.9, 31.7, and 43.0% in LSC, SSC, and IRs, respectively. A total of 132 genes are annotated, including 84 protein-coding genes, 38 tRNAs, 8 rRNAs, and 2 pseudogenes. The phylogenetic analysis revealed that was formed to be the early diverging species within .

摘要

是中国特有的重要观赏和园艺植物。在本研究中,我们利用高通量测序技术获得了[植物名称]的完整叶绿体基因组。完整的叶绿体序列是一个大小为157,091 bp的环状分子,由一个大单拷贝(LSC,86,061 bp)和一个小单拷贝(SSC;18,282 bp)组成,它们被一对反向重复序列(IRs;26,374 bp)隔开。总GC含量为37.8%,LSC、SSC和IRs中的GC含量分别为35.9%、31.7%和43.0%。共注释了132个基因,包括84个蛋白质编码基因、38个tRNA、8个rRNA和2个假基因。系统发育分析表明,[植物名称]是[所属类别]中早期分化的物种。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/da61/7782341/211b01138899/TMDN_A_1823266_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/da61/7782341/211b01138899/TMDN_A_1823266_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/da61/7782341/211b01138899/TMDN_A_1823266_F0001_C.jpg

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本文引用的文献

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Nucleic Acids Res. 2017 Jul 3;45(W1):W6-W11. doi: 10.1093/nar/gkx391.
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