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……的完整叶绿体基因组

The complete chloroplast genome of .

作者信息

Bao Zhenzhen, Zhu Ziyan, Zhang Haijiang, Zhong Yuan, Wang Weiqi, Zhang Jingzheng, Wu Jie

机构信息

School of pharmacy, Jiangsu Health Vocational College, Nanjing, P. R. China.

School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing, China.

出版信息

Mitochondrial DNA B Resour. 2019 Dec 27;5(1):360-361. doi: 10.1080/23802359.2019.1704200.

Abstract

(Trucz.) Schischk. is a traditional Chinese herbal medicine widely distributed in Eastern Siberia and Northern Asia. In this research, we assembled and characterized the complete chloroplast genome sequence of from high-throughput sequencing data. The chloroplast genome was 147,834 bp in length, consisting of large single-copy (LSC) and small single-copy (SSC) regions of 93,202 bp and 17,324 bp, respectively, which were separated by a pair of 18,654 bp inverted repeat (IR) regions. The genome is expected to contain 129 genes, including 85 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. The total GC content of the genome is 37.5%. A phylogenetic tree reconstructed by 40 chloroplast genomes reveals that is mostly related to .

摘要

(Trucz.)Schischk.是一种广泛分布于东西伯利亚和北亚的传统中草药。在本研究中,我们从高通量测序数据中组装并鉴定了其完整的叶绿体基因组序列。叶绿体基因组长度为147,834 bp,由分别为93,202 bp的大单拷贝(LSC)区域和17,324 bp的小单拷贝(SSC)区域组成,这两个区域被一对18,654 bp的反向重复(IR)区域隔开。该基因组预计包含129个基因,包括85个蛋白质编码基因、36个tRNA基因和8个rRNA基因。基因组的总GC含量为37.5%。由40个叶绿体基因组重建的系统发育树表明, 与 关系最为密切。 (原文中部分植物名称未给出具体中文,保留英文)

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8250/7748531/43c65fbf26b0/TMDN_A_1704200_F0001_B.jpg

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