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.的完整质体基因组及系统发育分析

The complete plastid genome and phylogenetic analysis of .

作者信息

Jia Xuli, Liu Tao, Li Ruoran, Jin Yuemei

机构信息

Laboratory of Genetics and Breeding of Marine Organism, College of Marine Life Sciences, Ocean University of China, Qingdao, China.

College of Life Sciences, Yantai University, Yantai, China.

出版信息

Mitochondrial DNA B Resour. 2020 Jan 7;5(1):402-403. doi: 10.1080/23802359.2019.1704196.

DOI:10.1080/23802359.2019.1704196
PMID:33366576
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7748513/
Abstract

, a nutrient-rich green algae that is both edible and medicinal, it is called a 'rat tail' because of its unique shape, it can reach up to a metre in length and has the functions of clearing heat and detoxifying, detumescence and water, and repelling insects. The plastid genome sequence of is 83,422 bp. A total of 105 genes were determined, including 77 protein-encoding genes, 3 rRNA genes, and 25 tRNA genes. Phylogenetic analysis showed that clustered together into a single branch with and sp. as sister branches. The plastid genome analysis will help the understanding of Chlorophyta evolution.

摘要

是一种营养丰富的绿藻,既可食用又有药用价值,因其独特形状被称为“鼠尾”,它能长到一米长,具有清热排毒、消肿利水和驱虫的功能。的质体基因组序列为83,422 bp。共确定了105个基因,包括77个蛋白质编码基因、3个rRNA基因和25个tRNA基因。系统发育分析表明,与和sp. 聚在一起形成一个单分支,和sp. 为姐妹分支。质体基因组分析将有助于对绿藻门进化的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b326/7748513/6a9c602904b6/TMDN_A_1704196_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b326/7748513/6a9c602904b6/TMDN_A_1704196_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b326/7748513/6a9c602904b6/TMDN_A_1704196_F0001_B.jpg

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本文引用的文献

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Immune-enhancing effects of anionic macromolecules extracted from Codium fragile on cyclophosphamide-treated mice.从脆弱拟马尾藻中提取的阴离子大分子对环磷酰胺处理小鼠的免疫增强作用。
PLoS One. 2019 Feb 19;14(2):e0211570. doi: 10.1371/journal.pone.0211570. eCollection 2019.
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Thrombolytic, anticoagulant and antiplatelet activities of codiase, a bi-functional fibrinolytic enzyme from Codium fragile.从脆弱马尾藻中提取的一种双功能纤溶酶 codiase 的溶栓、抗凝和抗血小板活性。
Biochimie. 2013 Jun;95(6):1266-77. doi: 10.1016/j.biochi.2013.01.023. Epub 2013 Feb 9.
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Anti-inflammatory effects of methanol extract of Codium fragile in lipopolysaccharide-stimulated RAW 264.7 cells.
脆江蓠甲醇提取物对脂多糖刺激的 RAW264.7 细胞的抗炎作用。
J Med Food. 2012 Jan;15(1):44-50. doi: 10.1089/jmf.2010.1540. Epub 2011 Nov 14.
4
Immunostimulating effects of a sulfated galactan from Codium fragile.脆江蓠硫酸半乳聚糖的免疫刺激作用。
Carbohydr Res. 2010 Jul 2;345(10):1452-4. doi: 10.1016/j.carres.2010.02.026. Epub 2010 Mar 3.
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The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs.用于检测tRNA和snoRNA的tRNAscan-SE、snoscan和snoGPS网络服务器。
Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W686-9. doi: 10.1093/nar/gki366.
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MrBayes 3: Bayesian phylogenetic inference under mixed models.MrBayes 3:混合模型下的贝叶斯系统发育推断。
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