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(蓝雪科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of (Plumbaginaceae).

作者信息

Li Jianfang, Xu Bei, Yang Qian, Wang Ting, Zhu Qianyang, Lin Yini, Liu Zhan-Lin

机构信息

Key Laboratory of Resource Biology and Biotechnology in Western China (Ministry of Education), College of Life Sciences, Northwest University, Xi'an, Shaanxi, China.

出版信息

Mitochondrial DNA B Resour. 2020 Jan 14;5(1):556-557. doi: 10.1080/23802359.2019.1710286.

Abstract

is a species-rich genus in Plumbaginaceae. In this study, we determined the complete chloroplast genome of for potential phylogenomic analysis in the future. The plastome is 174,033 bp in length, with a large single-copy region (LSC) of 96,128 bp, a small single-copy region (SSC) of 13,517 bp and a pair of inverted repeat regions (IRs) of 32,194 bp. It contains 132 genes, including 84 protein-coding genes, 37 tRNA genes, 8 rRNA genes, and 3 pseudogenes. The overall GC content is 36.7%, while the corresponding values for the LSC, SSC, and IR region are 34.9, 31.1, and 40.6%, respectively. The phylogenetic analysis supported that was clustered together with in family Plumbaginaceae.

摘要

是白花丹科中一个物种丰富的属。在本研究中,我们测定了该属的完整叶绿体基因组,以便未来进行潜在的系统发育基因组学分析。该质体基因组长度为174,033 bp,其中大单拷贝区域(LSC)为96,128 bp,小单拷贝区域(SSC)为13,517 bp,一对反向重复区域(IR)为32,194 bp。它包含132个基因,包括84个蛋白质编码基因、37个tRNA基因、8个rRNA基因和3个假基因。总体GC含量为36.7%,而LSC、SSC和IR区域的相应值分别为34.9%、31.1%和40.6%。系统发育分析支持该属与白花丹科中的另一属聚在一起。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9999/7748627/8206bbd4cac4/TMDN_A_1710286_F0001_B.jpg

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