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来自中国南海的一种新的深海盲鳗物种——南海盲鳗(黏盲鳗科:艾氏盲鳗属)的完整线粒体基因组。

The complete mitochondrial genome of a new deep-sea hagfish sp. Nan-Hai (Myxinidae: Eptatretus) from the South China Sea.

作者信息

Lian Chun-Ang, Li Jun-Yuan, Zhu Fang-Chao, Li Jun, He Li-Sheng

机构信息

Institute of Deep-sea Science and Engineering, Chinese Academy of Sciences, Sanya, China.

College of Earth Sciences, University of Chinese Academy of Sciences, Beijing, China.

出版信息

Mitochondrial DNA B Resour. 2020 Jan 14;5(1):619-620. doi: 10.1080/23802359.2019.1711220.

DOI:10.1080/23802359.2019.1711220
PMID:33366673
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7748873/
Abstract

In this study, the complete mitochondrial DNA sequence of a hagfish sp. Nan-Hai from a depth of 1000 m is presented. The complete sequence was determined using next-generation sequencing and long PCRs. The mitochondrial genome of sp. Nan-Hai is 17,538 bps in size and composed of 13 protein-coding genes, two ribosomal RNA genes, 22 transfer RNA genes, and one control region (D-loop). The base composition of mitochondrial genome is biased toward A + T content, at 67.21%, with GC skew of -0.35 and AT skew of -0.03. A phylogenetic tree revealed that within the genus , sp. Nan-Hai is closely related to .

摘要

在本研究中,呈现了一种来自1000米深处的盲鳗属南海盲鳗(Eptatretus sp. Nan-Hai)的完整线粒体DNA序列。该完整序列通过下一代测序和长链PCR确定。南海盲鳗的线粒体基因组大小为17,538碱基对,由13个蛋白质编码基因、两个核糖体RNA基因、22个转运RNA基因和一个控制区(D环)组成。线粒体基因组的碱基组成偏向A+T含量,为67.21%,GC偏斜为-0.35,AT偏斜为-0.03。系统发育树显示,在盲鳗属内,南海盲鳗与(此处原文缺失相关物种名)密切相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abbc/7748873/dd9aca9e1054/TMDN_A_1711220_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abbc/7748873/dd9aca9e1054/TMDN_A_1711220_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abbc/7748873/dd9aca9e1054/TMDN_A_1711220_F0001_B.jpg

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