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(海参纲:辛那参科)深海辛那参属一种海参的线粒体DNA全序列

Complete sequence of mitochondrial DNA of a deep-sea holothurian species of the genus (Synallactida: Synallactidae).

作者信息

Liao Meijie, Li Bin, Xiao Ning, Kong Miao, Wang Yingeng, Wang Jinjin, Rong Xiaojun, Zhang Zheng, Yu Yongxiang

机构信息

Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, China.

Qingdao National Laboratory for Marine Science and Technology, Laboratory for Marine Fisheries Science and Food Production Processes, Qingdao, China.

出版信息

Mitochondrial DNA B Resour. 2020 Jul 9;5(3):2699-2700. doi: 10.1080/23802359.2020.1787266.

Abstract

One complete mitochondrial genome (mitogenome) was determined for a deep-sea holothurian species of the genus (Synallactida: Synallactidae). The mitochondrial genome size of the sea cucumber was 15,920 bp. The sequence contains 2 ribosomal RNA genes (12S and 16S), 22 transfer RNA genes, and 13 protein-coding genes, as found in most previously determined holothurian mitogenomes. The A + T content of the complete mitochondrial genome sequence was 64.45%. The base composition showed a tendency of AT. The resulted maximum likelihood (ML) tree of Holothuroidea supported that sp. is a species of Synallactida.

摘要

测定了一种(仿刺参目:仿刺参科)深海海参属物种的一个完整线粒体基因组(线粒体基因组)。该海参的线粒体基因组大小为15,920 bp。该序列包含2个核糖体RNA基因(12S和16S)、22个转移RNA基因和13个蛋白质编码基因,这与大多数先前测定的海参线粒体基因组一致。完整线粒体基因组序列的A + T含量为64.45%。碱基组成呈现出AT倾向。所得的海参纲最大似然(ML)树支持[海参属物种名称]是仿刺参目的一个物种。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1801/7782141/7eda2a8c1649/TMDN_A_1787266_F0001_B.jpg

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