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(J. H. 威利斯)L. B. 摩尔(天门冬科,天门冬目)完整质体基因组的特征分析

Characterization of the complete plastid genome of (J. H. Willis) L. B. Moore (Asteliaceae, Asparagales).

作者信息

Amor Michael D, Holmes Gareth D, James Elizabeth A

机构信息

Royal Botanic Gardens Victoria, South Yarra, Australia.

出版信息

Mitochondrial DNA B Resour. 2020 Jan 16;5(1):656-657. doi: 10.1080/23802359.2019.1711233.

Abstract

is a robust understorey plant with a highly restricted distribution in southeastern Australia. Here we report its complete plastid genome. The genome was 157,943 bp in length and comprises a pair of inverted repeats (IRs) of 27,028 bp separated by a large single-copy region (LSC) of 85,699 bp, and a small single-copy region (SSC) of 18,188 bp. The GC content was 37.7%. In total, 132 genes were annotated including 81 protein-coding genes (PCGs), 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis of the PCGs from aligned with those from 10 Asparagales representatives confirms that, based on these taxa, is sister to and sits within the Asteliaceae.

摘要

是一种强健的林下植物,在澳大利亚东南部分布范围极为有限。在此我们报道其完整的质体基因组。该基因组长度为157,943 bp,由一对27,028 bp的反向重复序列(IRs)组成,中间被一个85,699 bp的大单拷贝区域(LSC)和一个18,188 bp的小单拷贝区域(SSC)隔开。GC含量为37.7%。总共注释了132个基因,包括81个蛋白质编码基因(PCGs)、38个tRNA基因和8个rRNA基因。对与10个天门冬目代表植物的PCGs进行比对后的系统发育分析证实,基于这些分类群,[具体植物名称1]是[具体植物名称2]的姐妹种,且属于星捧月科。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9efb/7748721/05f95b72f16f/TMDN_A_1711233_F0001_B.jpg

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