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茜草科东亚特有物种福建野海棠(Franch.)的完整质体基因组。

The complete plastid genome of Franch. (Rubiaceae), an endemic species from East Asia.

作者信息

Yang Li-E, Li Xiao-Juan, Peng De-Li

机构信息

Faculty of Geography, Yunnan Key Laboratory of Plateau Geographical Processes and Environmental Change, Yunnan Normal University, Kunming, China.

Key Laboratory of Plant Resources Conservation and Sustainable Utilization, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, China.

出版信息

Mitochondrial DNA B Resour. 2021 Dec 20;7(1):91-92. doi: 10.1080/23802359.2021.2009387. eCollection 2022.

DOI:10.1080/23802359.2021.2009387
PMID:34993322
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8725934/
Abstract

Franch. is an herbal plant species endemic to East Asia. Its complete plastid genome sequence is 155, 665 bp in length, with a large single-copy (LSC) region of 85, 788 bp, a small single-copy (SSC) region of 16, 977 bp, and a pair of inverted repeat regions (IRs) of 26, 450 bp. The whole plastid genome contains 132 genes, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content of plastid genome is 37.1%. . s evolutionarily close to tribe Rubieae according to the Maximum likelihood phylogenetic analysis based on 12 taxa.

摘要

鸡屎藤是一种东亚特有的草本植物物种。其完整的质体基因组序列长度为155,665碱基对,有一个85,788碱基对的大单拷贝(LSC)区域、一个16,977碱基对的小单拷贝(SSC)区域以及一对26,450碱基对的反向重复区域(IRs)。整个质体基因组包含132个基因,包括87个蛋白质编码基因、37个tRNA基因和8个rRNA基因。质体基因组的总体GC含量为37.1%。根据基于12个分类单元的最大似然系统发育分析,它在进化上与茜草族关系密切。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a04c/8725934/6a5584e78fb6/TMDN_A_2009387_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a04c/8725934/6a5584e78fb6/TMDN_A_2009387_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a04c/8725934/6a5584e78fb6/TMDN_A_2009387_F0001_C.jpg

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