• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

珀金斯(安息香科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of Perkins (Styracaceae).

作者信息

Xu Xiaogang, Zhang Yaoqin, Tong Lili, Wang Yabo, Xia Chongli

机构信息

Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Key Laboratory of State Forestry and Grassland Administration on Subtropical Forest Biodiversity Conservation, Nanjing Forestry University, Nanjing, China.

State Environmental Protection Scientific Observation and Research Station for Ecology and Environment of Wuyi Mountains, Nanping, China.

出版信息

Mitochondrial DNA B Resour. 2020 Feb 3;5(1):1029-1030. doi: 10.1080/23802359.2020.1722039.

DOI:10.1080/23802359.2020.1722039
PMID:33366860
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7748768/
Abstract

The object of this work was to measure the complete chloroplast genome of Perkins for the sake of offering valuable genomic information to promote its conservation. The circular genome of was measured as 157,913 bp in size and contained two inverted repeat (IRa and IRb) regions of 26,040 bp, which were separated by a large single-copy (LSC) region of 87,604 bp and a small single copy (SSC) region of 18,229 bp. A total of 134 genes are encoded, including 89 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content of genome is 36.97%. A phylogenetic tree reconstructed using 36 chloroplast genomes reveals that is most closely related with and

摘要

这项工作的目的是测定珀金斯的完整叶绿体基因组,以便提供有价值的基因组信息来促进其保护。其环状基因组大小为157,913 bp,包含两个26,040 bp的反向重复(IRa和IRb)区域,它们被一个87,604 bp的大单拷贝(LSC)区域和一个18,229 bp的小单拷贝(SSC)区域隔开。总共编码了134个基因,包括89个蛋白质编码基因、37个tRNA基因和8个rRNA基因。该基因组的总体GC含量为36.97%。使用36个叶绿体基因组重建的系统发育树表明,珀金斯与[具体物种1]和[具体物种2]关系最为密切。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3016/7748768/293eed2b9399/TMDN_A_1722039_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3016/7748768/293eed2b9399/TMDN_A_1722039_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3016/7748768/293eed2b9399/TMDN_A_1722039_F0001_B.jpg

相似文献

1
The complete chloroplast genome sequence of Perkins (Styracaceae).珀金斯(安息香科)的完整叶绿体基因组序列。
Mitochondrial DNA B Resour. 2020 Feb 3;5(1):1029-1030. doi: 10.1080/23802359.2020.1722039.
2
The complete chloroplast genome sequence of (Styracaceae).安息香科(Styracaceae)植物的叶绿体全基因组序列
Mitochondrial DNA B Resour. 2020 Jan 14;5(1):564-565. doi: 10.1080/23802359.2019.1710290.
3
The complete chloroplast genome of Perkins (Styracaceae).珀金斯安息香属(安息香科)的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2020 Jan 31;5(1):961-962. doi: 10.1080/23802359.2020.1721375.
4
The complete chloroplast genome of Perk. (Styracaceae).安息香科栓叶安息香的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2019 Dec 12;5(1):98-99. doi: 10.1080/23802359.2019.1698351.
5
The complete chloroplast genome sequence of S. M. Hwang (Styracaceae) from Jiangxi Province, China.来自中国江西省的安息香科中华安息香的完整叶绿体基因组序列。
Mitochondrial DNA B Resour. 2021 Apr 15;6(4):1395-1396. doi: 10.1080/23802359.2021.1909440.
6
The complete chloroplast genome sequence of (Styracaceae).安息香科(Styracaceae)某植物的叶绿体全基因组序列
Mitochondrial DNA B Resour. 2019 Nov 14;4(2):4051-4052. doi: 10.1080/23802359.2019.1688705.
7
The complete chloroplast genome of Hemsl. (Styracaceae).山茉莉(安息香科)的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2020 Jan 24;5(1):828-829. doi: 10.1080/23802359.2020.1715890.
8
The complete chloroplast genome sequence of , a species with an extremely small population.一种种群数量极少的物种的完整叶绿体基因组序列。
Mitochondrial DNA B Resour. 2018 Oct 29;3(2):998-999. doi: 10.1080/23802359.2018.1507639.
9
The complete chloroplast genome sequence of (Lour.) G. Don (Styracaceae).(野茉莉科)秤锤树(Lour.)G. Don的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2021 Mar 11;6(3):774-775. doi: 10.1080/23802359.2021.1882351.
10
The complete chloroplast genome sequence of Roxburgh (Styracaceae).紫树(安息香科)的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2021 Oct 7;6(11):3156-3158. doi: 10.1080/23802359.2021.1987170. eCollection 2021.

本文引用的文献

1
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.MEGA7:适用于更大数据集的分子进化遗传学分析版本7.0
Mol Biol Evol. 2016 Jul;33(7):1870-4. doi: 10.1093/molbev/msw054. Epub 2016 Mar 22.
2
MAFFT: iterative refinement and additional methods.MAFFT:迭代优化及其他方法。
Methods Mol Biol. 2014;1079:131-46. doi: 10.1007/978-1-62703-646-7_8.
3
CpGAVAS, an integrated web server for the annotation, visualization, analysis, and GenBank submission of completely sequenced chloroplast genome sequences.
CpGAVAS,一个整合的网络服务器,用于完全测序的叶绿体基因组序列的注释、可视化、分析和 GenBank 提交。
BMC Genomics. 2012 Dec 20;13:715. doi: 10.1186/1471-2164-13-715.
4
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes:一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.