• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种种群数量极少的物种的完整叶绿体基因组序列。

The complete chloroplast genome sequence of , a species with an extremely small population.

作者信息

Dong Fengping, Liu Xinhong, Shen Xin, Sheng Weixing, Jiang Dongyue, Li Yingang

机构信息

Zhejiang Academy of Forestry, Hangzhou, People's Republic of China.

Zhejiang Agriculture and Forestry University, Hangzhou, People's Republic of China.

出版信息

Mitochondrial DNA B Resour. 2018 Oct 29;3(2):998-999. doi: 10.1080/23802359.2018.1507639.

DOI:10.1080/23802359.2018.1507639
PMID:33474394
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800637/
Abstract

is an endemic species to China and is only distributed in Jiande, Zhejiang Province. The species is on the verge of extinction. The chloroplast genome of was determined from Illumina pair-end sequencing data. The sequence was 157,387 bp and consisted of one large (LSC, 87,193 bp) and one small (SSC, 18,286 bp) single-copy region region, separated by a pair of inverted repeat (IR, 25,954 bp) regions. The sequence included 116 genes, including 82 protein-coding genes, 19 rRNAs and 15 tRNAs. The overall GC content was 37.0%. A maximum likelihood phylogenetic analysis showed that Styracaceae was more closely related to Symplocaceae than to Ebenaceae.

摘要

是中国特有物种,仅分布于浙江省建德市。该物种濒临灭绝。通过Illumina双端测序数据确定了其叶绿体基因组。序列长度为157,387 bp,由一个大单拷贝区域(LSC,87,193 bp)和一个小单拷贝区域(SSC,18,286 bp)组成,由一对反向重复(IR,25,954 bp)区域隔开。该序列包含116个基因,包括82个蛋白质编码基因、19个rRNA和15个tRNA。总体GC含量为37.0%。最大似然系统发育分析表明,安息香科与山矾科的关系比与柿科的关系更密切。

相似文献

1
The complete chloroplast genome sequence of , a species with an extremely small population.一种种群数量极少的物种的完整叶绿体基因组序列。
Mitochondrial DNA B Resour. 2018 Oct 29;3(2):998-999. doi: 10.1080/23802359.2018.1507639.
2
The complete chloroplast genome sequence of (Styracaceae).安息香科(Styracaceae)植物的叶绿体全基因组序列
Mitochondrial DNA B Resour. 2020 Jan 14;5(1):564-565. doi: 10.1080/23802359.2019.1710290.
3
The complete chloroplast genome sequence of Perkins (Styracaceae).珀金斯(安息香科)的完整叶绿体基因组序列。
Mitochondrial DNA B Resour. 2020 Feb 3;5(1):1029-1030. doi: 10.1080/23802359.2020.1722039.
4
The complete chloroplast genome of Perk. (Styracaceae).安息香科栓叶安息香的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2019 Dec 12;5(1):98-99. doi: 10.1080/23802359.2019.1698351.
5
The complete chloroplast genome sequence of (Styracaceae).安息香科(Styracaceae)某植物的叶绿体全基因组序列
Mitochondrial DNA B Resour. 2019 Nov 14;4(2):4051-4052. doi: 10.1080/23802359.2019.1688705.
6
The complete chloroplast genome sequence of S. M. Hwang (Styracaceae) from Jiangxi Province, China.来自中国江西省的安息香科中华安息香的完整叶绿体基因组序列。
Mitochondrial DNA B Resour. 2021 Apr 15;6(4):1395-1396. doi: 10.1080/23802359.2021.1909440.
7
Characterization of the complete chloroplast genome of (Styracaceae), an endemic species from China.中国特有物种安息香科某植物完整叶绿体基因组的特征分析
Mitochondrial DNA B Resour. 2020 Jul 15;5(3):2811-2812. doi: 10.1080/23802359.2020.1789005.
8
The complete chloroplast genome sequence of Roxburgh (Styracaceae).紫树(安息香科)的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2021 Oct 7;6(11):3156-3158. doi: 10.1080/23802359.2021.1987170. eCollection 2021.
9
The complete chloroplast genome sequence of the endemic and rare orchid (Orchidaceae) in China.中国特有珍稀兰花(兰科)的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2021 Sep 13;6(10):2931-2932. doi: 10.1080/23802359.2021.1972867. eCollection 2021.
10
The complete chloroplast genome of Perkins (Styracaceae).珀金斯安息香属(安息香科)的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2020 Jan 31;5(1):961-962. doi: 10.1080/23802359.2020.1721375.

引用本文的文献

1
spp.: Habitat, Phenology, Phytochemicals, Biological Activity and Applications.物种:栖息地、物候学、植物化学物质、生物活性及应用。
Plants (Basel). 2025 Mar 1;14(5):746. doi: 10.3390/plants14050746.

本文引用的文献

1
MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.MEGA6:分子进化遗传学分析版本 6.0。
Mol Biol Evol. 2013 Dec;30(12):2725-9. doi: 10.1093/molbev/mst197. Epub 2013 Oct 16.
2
MAFFT multiple sequence alignment software version 7: improvements in performance and usability.MAFFT 多序列比对软件版本 7:性能和易用性的改进。
Mol Biol Evol. 2013 Apr;30(4):772-80. doi: 10.1093/molbev/mst010. Epub 2013 Jan 16.
3
Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data.
Geneious Basic:一个集成和可扩展的桌面软件平台,用于组织和分析序列数据。
Bioinformatics. 2012 Jun 15;28(12):1647-9. doi: 10.1093/bioinformatics/bts199. Epub 2012 Apr 27.
4
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes:一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
5
Using plastid genome-scale data to resolve enigmatic relationships among basal angiosperms.利用质体基因组规模数据解析基部被子植物间的神秘关系。
Proc Natl Acad Sci U S A. 2007 Dec 4;104(49):19363-8. doi: 10.1073/pnas.0708072104. Epub 2007 Nov 28.
6
Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns.对64个质体基因组中的81个基因进行分析,解析了被子植物之间的关系,并确定了基因组规模的进化模式。
Proc Natl Acad Sci U S A. 2007 Dec 4;104(49):19369-74. doi: 10.1073/pnas.0709121104. Epub 2007 Nov 28.
7
The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs.用于检测tRNA和snoRNA的tRNAscan-SE、snoscan和snoGPS网络服务器。
Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W686-9. doi: 10.1093/nar/gki366.
8
Automatic annotation of organellar genomes with DOGMA.使用DOGMA对细胞器基因组进行自动注释。
Bioinformatics. 2004 Nov 22;20(17):3252-5. doi: 10.1093/bioinformatics/bth352. Epub 2004 Jun 4.