一种种群数量极少的物种的完整叶绿体基因组序列。
The complete chloroplast genome sequence of , a species with an extremely small population.
作者信息
Dong Fengping, Liu Xinhong, Shen Xin, Sheng Weixing, Jiang Dongyue, Li Yingang
机构信息
Zhejiang Academy of Forestry, Hangzhou, People's Republic of China.
Zhejiang Agriculture and Forestry University, Hangzhou, People's Republic of China.
出版信息
Mitochondrial DNA B Resour. 2018 Oct 29;3(2):998-999. doi: 10.1080/23802359.2018.1507639.
is an endemic species to China and is only distributed in Jiande, Zhejiang Province. The species is on the verge of extinction. The chloroplast genome of was determined from Illumina pair-end sequencing data. The sequence was 157,387 bp and consisted of one large (LSC, 87,193 bp) and one small (SSC, 18,286 bp) single-copy region region, separated by a pair of inverted repeat (IR, 25,954 bp) regions. The sequence included 116 genes, including 82 protein-coding genes, 19 rRNAs and 15 tRNAs. The overall GC content was 37.0%. A maximum likelihood phylogenetic analysis showed that Styracaceae was more closely related to Symplocaceae than to Ebenaceae.
是中国特有物种，仅分布于浙江省建德市。该物种濒临灭绝。通过Illumina双端测序数据确定了其叶绿体基因组。序列长度为157,387 bp，由一个大单拷贝区域（LSC，87,193 bp）和一个小单拷贝区域（SSC，18,286 bp）组成，由一对反向重复（IR，25,954 bp）区域隔开。该序列包含116个基因，包括82个蛋白质编码基因、19个rRNA和15个tRNA。总体GC含量为37.0%。最大似然系统发育分析表明，安息香科与山矾科的关系比与柿科的关系更密切。
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