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杨柳科(Salicaceae)植物叶绿体全基因组特征分析

Characterization of the complete chloroplast genome of (Salicaceae).

作者信息

Ma Rui, Zhou Mijuan, Wang Yujie, Zhu Guoyu, Li Junyi, Feng Qiuhong, Miao Ning

机构信息

Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education/College of Life Sciences, Sichuan University, Chengdu, Sichuan, P. R. China.

Forestry and Grassland Bureau of Hongyuan County, Hongyuan, Sichuan, P. R. China.

出版信息

Mitochondrial DNA B Resour. 2020 Feb 3;5(1):1054-1055. doi: 10.1080/23802359.2020.1721374.

Abstract

The complete chloroplast genome sequence of , a native shrub willow species in the south of China, has been characterized using Illumina pair-end sequencing. The plastome is 155,093 bp in length, with one large single copy region of 83,956 bp, one small single copy region of 16,221 bp, and two inverted repeat (IR) regions of 27,458 bp. It contains 116 genes, including 79 protein-coding genes, 8 ribosomal RNA, and 36 transfer RNA. Phylogenetic tree shows that this species is a sister species to . The plastome of can provide significant insight for elucidating the phylogenetic relationship of taxa within Salicaceae.

摘要

利用Illumina双端测序技术对中国南方本土灌木柳树物种 的完整叶绿体基因组序列进行了表征。该质体基因组长度为155,093 bp,有一个83,956 bp的大单拷贝区域、一个16,221 bp的小单拷贝区域和两个27,458 bp的反向重复(IR)区域。它包含116个基因,包括79个蛋白质编码基因、8个核糖体RNA和36个转移RNA。系统发育树表明该物种是 的姐妹物种。 的质体基因组可为阐明杨柳科内分类群的系统发育关系提供重要见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fefe/7748764/002831a542ce/TMDN_A_1721374_F0001_C.jpg

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