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一种重要观赏植物(蔷薇科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of (Rosaceae), an important ornamental plant.

作者信息

Wang Shuai, Yang Jing, Zhang Bin, Shang Fude, Wang Hongwei

机构信息

College of Life Science, Henan Agricultural University, Zhengzhou, China.

College of Forestry, Henan Agricultural University, Zhengzhou, China.

出版信息

Mitochondrial DNA B Resour. 2020 May 27;5(3):2155-2156. doi: 10.1080/23802359.2020.1768936. eCollection 2020.

Abstract

is an important ornamental plant resource. Herein, we determined the complete chloroplast (cp) genome sequence of using Illumina sequencing data. The whole cp genome is 160,089 bp in size, consisting of a pair of inverted repeats (IR 52,706 bp), a large single-copy region (LSC 88,189 bp), and a small single-copy region (SSC 19,194 bp). The plastid genome contains 129 genes, 84 protein-coding genes, 37 tRNA genes, and eight rRNA genes. In addition, a maximum-likelihood phylogenetic analysis demonstrated that was most closely related to . The complete plastome sequence will provide useful genetic information for phylogenetic studies, the resolution of taxonomic discrepancies, and molecular breeding.

摘要

是一种重要的观赏植物资源。在此,我们利用Illumina测序数据确定了的完整叶绿体(cp)基因组序列。整个cp基因组大小为160,089 bp,由一对反向重复序列(IR 52,706 bp)、一个大单拷贝区域(LSC 88,189 bp)和一个小单拷贝区域(SSC 19,194 bp)组成。质体基因组包含129个基因,84个蛋白质编码基因,37个tRNA基因和8个rRNA基因。此外,最大似然系统发育分析表明与关系最为密切。完整的质体基因组序列将为系统发育研究、分类学差异的解决和分子育种提供有用的遗传信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d081/7510752/25b997c4a506/TMDN_A_1768936_F0001_B.jpg

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