• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

相似文献

1
Origin of Free Energy Barriers of Decarboxylation and the Reverse Process of CO Capture in Dimethylformamide and in Water.脱羧反应自由能势垒的起源及 CO 在二甲基甲酰胺和水中捕获的逆过程。
J Am Chem Soc. 2021 Jan 13;143(1):137-141. doi: 10.1021/jacs.0c12414. Epub 2020 Dec 29.
2
Solvation Induction of Free Energy Barriers of Decarboxylation Reactions in Aqueous Solution from Dual-Level QM/MM Simulations.基于双水平量子力学/分子力学模拟的水溶液中脱羧反应自由能垒的溶剂化诱导
JACS Au. 2021 Jan 19;1(2):233-244. doi: 10.1021/jacsau.0c00110. eCollection 2021 Feb 22.
3
Direct reversible decarboxylation from stable organic acids in dimethylformamide solution.在二甲基甲酰胺溶液中稳定有机酸的直接可逆脱羧反应。
Science. 2020 Jul 31;369(6503):557-561. doi: 10.1126/science.abb4129. Epub 2020 Jun 18.
4
Decarboxylation, CO2 and the reversion problem.脱羧作用、CO2 和逆转问题。
Acc Chem Res. 2015 Nov 17;48(11):2843-9. doi: 10.1021/acs.accounts.5b00306. Epub 2015 Nov 3.
5
Ultrafast 2D-IR and simulation investigations of preferential solvation and cosolvent exchange dynamics.超快二维红外光谱及优先溶剂化和助溶剂交换动力学的模拟研究
J Phys Chem B. 2015 May 21;119(20):6271-9. doi: 10.1021/acs.jpcb.5b01952. Epub 2015 May 12.
6
Transition-metal-free carboxylation of organozinc reagents using CO2 in DMF solvent.在DMF溶剂中使用二氧化碳对有机锌试剂进行无过渡金属羧基化反应。
Org Lett. 2009 May 7;11(9):2035-7. doi: 10.1021/ol900528h.
7
Characterization of the carboxylate delivery module of transcarboxylase: following spontaneous decarboxylation of the 1.3S-CO2- subunit by NMR and FTIR spectroscopies.转羧酶的羧酸盐传递模块的表征:通过核磁共振和傅里叶变换红外光谱法跟踪1.3S-CO2-亚基的自发脱羧反应。
Biochemistry. 2002 Feb 19;41(7):2191-7. doi: 10.1021/bi0116442.
8
From Solution Studies of Pharmaceuticals (Aspirin and Related Compounds) to the Thermodynamics of Aspirin-β-Cyclodextrin Interaction in water and N,N-Dimethylformamide.从药物(阿司匹林及相关化合物)的溶液研究到阿司匹林-β-环糊精在水和 N,N-二甲基甲酰胺中的热力学相互作用。
Int J Mol Sci. 2022 Oct 4;23(19):11750. doi: 10.3390/ijms231911750.
9
Decarboxylation without CO2: why bicarbonate forms directly as trichloroacetate is converted to chloroform.无二氧化碳的脱羧反应:三氯乙酸转化为氯仿时直接形成碳酸氢盐的原因。
J Org Chem. 2014 Nov 21;79(22):10972-80. doi: 10.1021/jo501990u. Epub 2014 Nov 7.
10
Ab Initio Molecular Dynamics Study on the Interactions between Carboxylate Ions and Metal Ions in Water.水中羧酸根离子与金属离子相互作用的从头算分子动力学研究
J Phys Chem B. 2015 Aug 20;119(33):10710-9. doi: 10.1021/acs.jpcb.5b05616. Epub 2015 Aug 10.

引用本文的文献

1
Unlocking the Comparative Potential of Porous Frameworks: A Review on MOFs and COFs for Gas Sorption.释放多孔框架材料的比较潜力:关于金属有机框架材料(MOFs)和共价有机框架材料(COFs)用于气体吸附的综述
Top Curr Chem (Cham). 2025 Aug 26;383(3):32. doi: 10.1007/s41061-025-00517-9.
2
HEPOM: Using Graph Neural Networks for the Accelerated Predictions of Hydrolysis Free Energies in Different pH Conditions.HEPOM:利用图神经网络加速预测不同pH条件下的水解自由能
J Chem Inf Model. 2025 Apr 28;65(8):3963-3975. doi: 10.1021/acs.jcim.4c02443. Epub 2025 Apr 4.
3
Adenylate Kinase-Catalyzed Reactions of AMP in Pieces: Specificity for Catalysis at the Nucleoside Activator and Dianion Catalytic Sites.片段化 AMP 的腺苷酸激酶催化反应:核苷激活剂和二价阴离子催化部位催化的特异性。
Biochemistry. 2022 Dec 6;61(23):2766-2775. doi: 10.1021/acs.biochem.2c00531. Epub 2022 Nov 22.
4
Late-Stage Carbon-14 Labeling and Isotope Exchange: Emerging Opportunities and Future Challenges.晚期碳-14标记与同位素交换:新机遇与未来挑战
JACS Au. 2022 Jun 7;2(6):1234-1251. doi: 10.1021/jacsau.2c00030. eCollection 2022 Jun 27.
5
Photochemistry of the pyruvate anion produces CO, CO, CH, CH, and a low energy electron.丙酮酸负离子的光化学产生 CO、CO、CH、CH 和一个低能量电子。
Nat Commun. 2022 Feb 17;13(1):937. doi: 10.1038/s41467-022-28582-4.
6
Solvation Induction of Free Energy Barriers of Decarboxylation Reactions in Aqueous Solution from Dual-Level QM/MM Simulations.基于双水平量子力学/分子力学模拟的水溶液中脱羧反应自由能垒的溶剂化诱导
JACS Au. 2021 Jan 19;1(2):233-244. doi: 10.1021/jacsau.0c00110. eCollection 2021 Feb 22.

本文引用的文献

1
Direct reversible decarboxylation from stable organic acids in dimethylformamide solution.在二甲基甲酰胺溶液中稳定有机酸的直接可逆脱羧反应。
Science. 2020 Jul 31;369(6503):557-561. doi: 10.1126/science.abb4129. Epub 2020 Jun 18.
2
Transition-Metal-Free Carbon Isotope Exchange of Phenyl Acetic Acids.过渡金属自由的苯乙酸碳同位素交换。
Angew Chem Int Ed Engl. 2020 Aug 3;59(32):13490-13495. doi: 10.1002/anie.202002341. Epub 2020 May 27.
3
From Carbodiimides to Carbon Dioxide: Quantification of the Electrophilic Reactivities of Heteroallenes.从碳二亚胺到二氧化碳:杂联烯亲电反应活性的定量分析
J Am Chem Soc. 2020 May 6;142(18):8383-8402. doi: 10.1021/jacs.0c01960. Epub 2020 Apr 27.
4
The Emergence of Carbon Isotope Exchange.碳同位素交换的出现。
Angew Chem Int Ed Engl. 2019 Jul 15;58(29):9678-9680. doi: 10.1002/anie.201905368. Epub 2019 Jun 12.
5
Biologically generated carbon dioxide: nature's versatile chemical strategies for carboxy lyases.生物生成的二氧化碳:羧化酶的自然多功能化学策略。
Nat Prod Rep. 2020 Jan 1;37(1):100-135. doi: 10.1039/c9np00015a. Epub 2019 May 10.
6
Dynamic Carbon Isotope Exchange of Pharmaceuticals with Labeled CO.药物与标记 CO 的动态碳同位素交换
J Am Chem Soc. 2019 Jan 16;141(2):780-784. doi: 10.1021/jacs.8b12140. Epub 2018 Dec 31.
7
Orotidine 5'-Monophosphate Decarboxylase: Probing the Limits of the Possible for Enzyme Catalysis.乳清酸 5′-单磷酸脱羧酶:探索酶催化的可能极限。
Acc Chem Res. 2018 Apr 17;51(4):960-969. doi: 10.1021/acs.accounts.8b00059. Epub 2018 Mar 29.
8
Substituent and Solvent Effects on the Stability of N-Heterocyclic Carbene Complexes with CO.取代基和溶剂对 N-杂环卡宾配合物与 CO 稳定性的影响。
J Org Chem. 2017 Feb 3;82(3):1552-1557. doi: 10.1021/acs.joc.6b02755. Epub 2017 Jan 23.
9
Enzymatic Kinetic Isotope Effects from Path-Integral Free Energy Perturbation Theory.路径积分自由能微扰理论中的酶动力学同位素效应
Methods Enzymol. 2016;577:359-88. doi: 10.1016/bs.mie.2016.05.057. Epub 2016 Jul 22.
10
Decarboxylation, CO2 and the reversion problem.脱羧作用、CO2 和逆转问题。
Acc Chem Res. 2015 Nov 17;48(11):2843-9. doi: 10.1021/acs.accounts.5b00306. Epub 2015 Nov 3.

脱羧反应自由能势垒的起源及 CO 在二甲基甲酰胺和水中捕获的逆过程。

Origin of Free Energy Barriers of Decarboxylation and the Reverse Process of CO Capture in Dimethylformamide and in Water.

机构信息

Institute of Systems and Physical Biology, Shenzhen Bay Laboratory, Shenzhen 581055, China.

Institute of Theoretical Chemistry, Jilin University, Changchun 100231, China.

出版信息

J Am Chem Soc. 2021 Jan 13;143(1):137-141. doi: 10.1021/jacs.0c12414. Epub 2020 Dec 29.

DOI:10.1021/jacs.0c12414
PMID:33375792
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8058934/
Abstract

In aqueous solution, biological decarboxylation reactions proceed irreversibly to completion, whereas the reverse carboxylation processes are typically powered by the hydrolysis of ATP. The exchange of the carboxylate of ring-substituted arylacetates with isotope-labeled CO in polar aprotic solvents reported recently suggests a dramatic change in the partition of reaction pathways. Yet, there is little experimental data pertinent to the kinetic barriers for protonation and thermodynamic data on CO capture by the carbanions of decarboxylation reactions. Employing a combined quantum mechanical and molecular mechanical simulation approach, we investigated the decarboxylation reactions of a series of organic carboxylate compounds in aqueous and in dimethylformamide solutions, revealing that the reverse carboxylation barriers in solution are fully induced by solvent effects. A linear Bell-Evans-Polanyi relationship was found between the rates of decarboxylation and the Gibbs energies of reaction, indicating diminishing recombination barriers in DMF. In contrast, protonation of the carbanions by the DMF solvent has large free energy barriers, rendering the competing exchange of isotope-labeled CO reversible in DMF. The finding of an intricate interplay of carbanion stability and solute-solvent interaction in decarboxylation and carboxylation could be useful to designing novel materials for CO capture.

摘要

在水溶液中,生物脱羧反应不可逆地进行完全,而反向羧化过程通常由 ATP 的水解来驱动。最近报道的在极性非质子溶剂中环取代芳基乙酸酯的羧酸根与同位素标记的 CO 的交换表明,反应途径的分配发生了显著变化。然而,与质子化的动力学障碍和脱羧反应的碳负离子捕获 CO 的热力学数据相关的实验数据很少。我们采用了量子力学和分子力学模拟相结合的方法,研究了一系列有机羧酸化合物在水溶液和二甲基甲酰胺溶液中的脱羧反应,结果表明,溶剂效应对反应的反向羧化壁垒具有完全的诱导作用。我们发现脱羧反应的速率与反应的吉布斯能之间存在线性贝尔-埃文斯-波利尼关系,这表明在 DMF 中重组势垒减小。相比之下,DMF 溶剂对碳负离子的质子化具有较大的自由能障碍,使得同位素标记的 CO 的竞争交换在 DMF 中可逆。脱羧和羧化过程中碳负离子稳定性和溶质-溶剂相互作用的复杂相互作用的发现,可能有助于设计用于 CO 捕获的新型材料。