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免疫沉淀法从鼠海马体星形细胞突触旁过程中提取核糖体结合的 mRNAs。

Immunoprecipitation of Ribosome-Bound mRNAs from Astrocytic Perisynaptic Processes of the Mouse Hippocampus.

机构信息

Physiology and Physiopathology of the Gliovascular Unit Research Group, Center for Interdisciplinary Research in Biology (CIRB), College de France, CNRS Unité Mixte de Recherche 724, INSERM Unité 1050, Labex Memolife, PSL Research University, Paris, France.

Neuroglial Interactions in Cerebral Physiopathology Research Group, Center for Interdisciplinary Research in Biology (CIRB), College de France, CNRS Unité Mixte de Recherche 724, INSERM Unité 1050, Labex Memolife, PSL Research University, Paris, France.

出版信息

STAR Protoc. 2020 Dec 4;1(3):100198. doi: 10.1016/j.xpro.2020.100198. eCollection 2020 Dec 18.

DOI:10.1016/j.xpro.2020.100198
PMID:33377092
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7757553/
Abstract

Translation of distally localized mRNAs is an evolutionary mechanism occurring in polarized cells. It has been observed in astrocytes, whose processes contact blood vessels and synapses. Here, we describe a protocol for the purification of the entire pool of ribosome-bound mRNAs in perisynaptic astrocytic processes (PAPs). Our procedure combines the preparation of synaptogliosomes with a refined translating ribosome affinity purification technique. This approach can be used in any brain region to probe the physiological relevance of local translation in PAPs. For complete details on the use and execution of this protocol, please refer to Mazaré et al. (2020).

摘要

远端定位的 mRNA 翻译是一种发生在极化细胞中的进化机制。这种机制在与血管和突触接触的星形胶质细胞中被观察到。在这里,我们描述了一种在突触旁星形胶质细胞突起(PAPs)中纯化整个核糖体结合的 mRNA 库的方案。我们的程序将突触小体的制备与改良的翻译核糖体亲和纯化技术结合在一起。这种方法可以在任何脑区中用于探测 PAPs 中局部翻译的生理相关性。有关此方案的使用和执行的完整详细信息,请参阅 Mazaré 等人。(2020 年)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/496d/7757553/f2bac0ffd6db/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/496d/7757553/f3996d8c0121/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/496d/7757553/3762b18017f9/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/496d/7757553/37c3e5c02e1c/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/496d/7757553/f2bac0ffd6db/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/496d/7757553/f3996d8c0121/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/496d/7757553/3762b18017f9/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/496d/7757553/37c3e5c02e1c/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/496d/7757553/f2bac0ffd6db/gr3.jpg

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本文引用的文献

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Cell Rep. 2020 Aug 25;32(8):108076. doi: 10.1016/j.celrep.2020.108076.
2
Local protein synthesis is a ubiquitous feature of neuronal pre- and postsynaptic compartments.局部蛋白质合成是神经元突触前和突触后区普遍存在的特征。
Science. 2019 May 17;364(6441). doi: 10.1126/science.aau3644.
3
Cell type-specific mRNA purification by translating ribosome affinity purification (TRAP).
核糖体相关蛋白 RACK1 抑制星形胶质细胞中 Kir4.1 的翻译并影响神经元活性。
Cell Rep. 2023 May 30;42(5):112456. doi: 10.1016/j.celrep.2023.112456. Epub 2023 Apr 30.
4
Development, validation, and application of the ribosome separation and reconstitution system for protein translation in vitro.核糖体分离与重建系统的开发、验证及其在体外蛋白质翻译中的应用。
RNA. 2021 Dec;27(12):1602-1616. doi: 10.1261/rna.078852.121. Epub 2021 Aug 27.
5
Protocol to extract actively translated mRNAs from mouse hypothalamus by translating ribosome affinity purification.通过翻译核糖体亲和纯化技术从小鼠下丘脑提取活跃翻译的 mRNAs 的方案。
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通过翻译核糖体亲和纯化(TRAP)进行细胞类型特异性mRNA纯化。
Nat Protoc. 2014;9(6):1282-91. doi: 10.1038/nprot.2014.085. Epub 2014 May 8.
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The local transcriptome in the synaptic neuropil revealed by deep sequencing and high-resolution imaging.通过深度测序和高分辨率成像揭示的突触神经突中的局部转录组。
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Structural plasticity of perisynaptic astrocyte processes involves ezrin and metabotropic glutamate receptors.突触周星形胶质细胞突起的结构可塑性涉及 ezrin 和代谢型谷氨酸受体。
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