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[物种名称]对氮限制条件响应的代谢组学分析

Metabolomic Analysis of Response to Nitrogen-Limiting Conditions in spp.

作者信息

Dissook Sivamoke, Putri Sastia Prama, Fukusaki Eiichiro

机构信息

Department of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan.

出版信息

Metabolites. 2020 Dec 29;11(1):16. doi: 10.3390/metabo11010016.

Abstract

is a yeast genus that has been used as a model oleaginous taxon for a wide array of studies. However, information regarding metabolite changes within spp. under different environmental conditions is still limited. Among various factors affecting metabolism, nitrogen-limiting conditions have a profound effect on the metabolic state of yeast. In this study, a time-course LC-MS/MS-based metabolome analysis of was performed to determine the optimal cultivation time and carbon-to-nitrogen ratio for studying the effects of nitrogen-limiting conditions on ; we found that cultivation time of 36 h and carbon-to-nitrogen ratio of 4:1 and 5:0 was suitable for studying the effects of nitrogen-limiting conditions on and these conditions were applied to six strains of . These six strains of showed similar responses to nitrogen-limiting conditions; however, each strain had a unique metabolomic profile. Purine and pyrimidine metabolism were the most highly affected biological pathways in nitrogen-limiting conditions, indicating that these conditions affect energy availability within cells. This stress leads to a shift in cells to the utilization of a less ATP-dependent biological pathway. This information will be beneficial for the development of strains for further scientific and industrial applications.

摘要

是一个酵母属,已被用作多种研究的模式产油分类单元。然而,关于在不同环境条件下该属内代谢物变化的信息仍然有限。在影响其代谢的各种因素中,氮限制条件对酵母的代谢状态有深远影响。在本研究中,对该属进行了基于液相色谱-串联质谱的代谢组学时间进程分析,以确定研究氮限制条件对其影响的最佳培养时间和碳氮比;我们发现36小时的培养时间以及4:1和5:0的碳氮比适合研究氮限制条件对该属的影响,并且这些条件应用于该属的六个菌株。这六个菌株对氮限制条件表现出相似的反应;然而,每个菌株都有独特的代谢组学特征。嘌呤和嘧啶代谢是氮限制条件下受影响最严重的生物途径,表明这些条件影响细胞内的能量可用性。这种应激导致细胞转向利用较少依赖ATP的生物途径。这些信息将有利于开发该属菌株以用于进一步的科学和工业应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e29b/7823547/7b5c20292638/metabolites-11-00016-g001.jpg

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