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保守的精氨酸 20、谷氨酸 74 和天冬氨酸 77 对水稻类谷胱甘肽 S-转移酶结构和功能的影响。

Effects of conserved Arg20, Glu74 and Asp77 on the structure and function of a tau class glutathione S-transferase in rice.

机构信息

College of Life Sciences, Jilin Agricultural University, Changchun, 130118, China.

State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, The Chinese Academy of Sciences, Beijing, 100093, China.

出版信息

Plant Mol Biol. 2021 Mar;105(4-5):451-462. doi: 10.1007/s11103-020-01099-4. Epub 2021 Jan 2.

Abstract

The relative position of domains is critical for enzymatic properties of tau class glutathione S-transferases, and altering the position of linker far away from the active center affects catalytic property. Glutathione S-transferases (GSTs) are a family of phase II detoxification enzymes whose main function is to improve plant resistance to stresses. To understand the structural effects of tau class GSTs on their function, using OsGSTU17 as an example, we predicted the residues involved in the interactions between its domains and linker region. We further detected the structural changes in mutants and the corresponding changes in terms of substrate activity and kinetic parameters. Four pairs of residues, including Ala14 and Trp165, Arg20 and Tyr154, Glu74 and Arg98, Asp77 and Met87, forming hydrogen bonds and salt bridges were found to play important roles in maintaining the relative position between the domains and linker region inside the protein. The hydrogen bond between Trp165 and Ala14 affected the structural stability has been demonstrated in our previous study. The mutant R20A lost almost all catalytic activity. Interestingly, the mutant E74A exhibited a significant decrease in activity towards 7-chloro-4-nitrobenzo-2-oxa-1, 3-diazole, 1-chloro-2, 4-dinitrobenzene and 4-nitrobenzyl chloride, while its activity towards substrate cumene hydroperoxide remained unchanged. Compared with other mutants, the mutant D77A exhibited decreased affinity to its substrates and increased activity towards 1-chloro-2, 4-dinitrobenzene and cumene hydroperoxide, but its thermodynamic stability did not change significantly. The relative position of individual domain was critical for enzymatic properties, and the linker which is far away from the active site could change the enzymatic properties of GSTs via altering the relative position of the individual domain. Our results provide insights into the relationship between structure and function of tau class GSTs.

摘要

结构域的相对位置对 tau 类谷胱甘肽 S-转移酶的酶学性质至关重要,并且改变远离活性中心的连接子的位置会影响催化性质。谷胱甘肽 S-转移酶(GSTs)是一类 II 相解毒酶,其主要功能是提高植物对胁迫的抗性。为了了解 tau 类 GSTs 对其功能的结构影响,我们以 OsGSTU17 为例,预测了其结构域和连接子区域相互作用涉及的残基。我们进一步检测了突变体的结构变化及其对底物活性和动力学参数的相应变化。发现包括 Ala14 和 Trp165、Arg20 和 Tyr154、Glu74 和 Arg98、Asp77 和 Met87 在内的四对残基形成氢键和盐桥,在维持蛋白质内部结构域和连接子区域的相对位置方面发挥着重要作用。我们之前的研究已经证明了 Trp165 和 Ala14 之间氢键对结构稳定性的影响。突变体 R20A 几乎失去了所有的催化活性。有趣的是,突变体 E74A 对 7-氯-4-硝基苯并-2-氧代-1,3-二唑、1-氯-2,4-二硝基苯和 4-硝基苄基氯的活性显著降低,而其对底物 cumene 过氧化物的活性保持不变。与其他突变体相比,突变体 D77A 对其底物的亲和力降低,对 1-氯-2,4-二硝基苯和 cumene 过氧化物的活性增加,但热力学稳定性没有明显变化。单个结构域的相对位置对酶学性质至关重要,远离活性位点的连接子可以通过改变单个结构域的相对位置来改变 GSTs 的酶学性质。我们的结果为 tau 类 GSTs 的结构与功能之间的关系提供了深入的了解。

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