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肠道微生物特征有助于急性缺血性脑卒中的诊断。

Gut Microbiotic Features Aiding the Diagnosis of Acute Ischemic Stroke.

机构信息

Department of Integrative Chinese and Western Medicine, The First Affiliated Hospital of Guangdong Pharmaceutical University, Guangzhou, China.

Department of Dermatology, Jinling Hospital, Southern Medical University, Nanjing, China.

出版信息

Front Cell Infect Microbiol. 2020 Dec 21;10:587284. doi: 10.3389/fcimb.2020.587284. eCollection 2020.

Abstract

Increasing evidence suggests that features of the gut microbiota correlate with ischemic stroke. However, the specific characteristics of the gut microbiota in patients suffering different types of ischemic stroke, or recovering from such strokes, have rarely been studied, and potential microbiotic predictors of different types of stroke have seldom been analyzed. We subjected fecal specimens from patients with lacunar or non-lacunar acute ischemic infarctions, and those recovering from such strokes, to bacterial 16S rRNA sequencing and compared the results to those of healthy volunteers. We identified microbial markers of different types of ischemic stroke and verified that these were of diagnostic utility. Patients with two types of ischemic stroke, and those recovering from ischemic stroke, exhibited significant shifts in microbiotic diversities compared to healthy subjects. Cluster of Orthologous Groups of Proteins (COG) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses revealed reduced metabolic and transport-related pathway activities in ischemic stroke patients. We performed fivefold cross-validation using a Random Forest model to identify two optimal bacterial species (operational taxonomic units; OTUs) serving as markers of lacunar infarction; these were (OTU_45) and (OTU_4), and the areas under the receiver operating characteristic curves (AUCs under the ROCs) were 0.881 and 0.872 respectively. In terms of non-lacunar acute ischemic infarction detection, the two optimal species were (OTU_330) and (OTU_338); the AUCs under the ROCs were 0.985 and 0.929 respectively. In post-ischemic stroke patients, the three optimal species were (OTU_35), (OTU_303), and (OTU_9); the AUCs under the ROCs were 1, 0.897, and 0.846 respectively. Notably, the gut microbial markers were of considerable value for utility when diagnosing lacunar infarction, non-lacunar acute ischemic infarction, and post-ischemic stroke. This study is the first to characterize the gut microbiotic profiles of patients with lacunar or non-lacunar, acute ischemic strokes, and those recovering from stroke, and to identify microbiotic predictors of such strokes.

摘要

越来越多的证据表明,肠道微生物群的特征与缺血性中风有关。然而,患有不同类型缺血性中风或从中风恢复的患者的肠道微生物群的具体特征很少被研究,不同类型中风的潜在微生物预测因子也很少被分析。我们对腔隙性或非腔隙性急性缺血性梗死患者以及从中风恢复的患者的粪便标本进行了细菌 16S rRNA 测序,并将结果与健康志愿者进行了比较。我们确定了不同类型缺血性中风的微生物标志物,并验证了这些标志物具有诊断效用。与健康受试者相比,患有两种类型缺血性中风和从中风恢复的患者的微生物多样性发生了显著变化。聚类分析显示,与健康对照组相比,缺血性中风患者的代谢和运输相关途径的活性降低。我们使用随机森林模型进行了五倍交叉验证,以识别两种作为腔隙性梗死标志物的最佳细菌种(操作分类单元;OTU);分别是 (OTU_45)和 (OTU_4),受试者工作特征曲线下的面积(ROC 下的 AUC)分别为 0.881 和 0.872。在检测非腔隙性急性缺血性梗死方面,两种最佳的种是 (OTU_330)和 (OTU_338);ROC 下的 AUC 分别为 0.985 和 0.929。在缺血性中风后患者中,三种最佳的种是 (OTU_35)、 (OTU_303)和 (OTU_9);ROC 下的 AUC 分别为 1、0.897 和 0.846。值得注意的是,这些肠道微生物标志物在诊断腔隙性梗死、非腔隙性急性缺血性梗死和缺血性中风后具有很高的应用价值。本研究首次对腔隙性或非腔隙性、急性缺血性中风患者以及从中风恢复的患者的肠道微生物群特征进行了描述,并确定了此类中风的微生物预测因子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/935a/7779606/e68037a4e52a/fcimb-10-587284-g001.jpg

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