Laboratory of Insect Virology, Department of Biochemistry and Molecular Biology, Federal University of Santa Maria, Santa Maria, RS, 97105-900, Brazil.
Embrapa Soja, Londrina, PR, 86001-970, Brazil.
Braz J Microbiol. 2021 Mar;52(1):219-227. doi: 10.1007/s42770-020-00402-1. Epub 2021 Jan 6.
We described the complete genome sequence of a novel baculovirus isolate of species Buzura suppressaria nucleopolyhedrovirus, called by isolate CNPSo-25. The occlusion bodies were found to be polyhedral in shape and to contain virions with singly embedded nucleocapsids. The size of the genome is 121,377 bp with a G+C content of 36.7%. We annotated 131 ORFs that cover 90.42% of the genome. Moreover, phylogenetic inference indicated that CNPSo-25 is a member of genus Alphabaculovirus that clustered together with two other Chinese isolates of the same species. We called the virus by Biston suppressaria nucleopolyhedrovirus isolate CNPSo-25 (BisuNPV-CNPSo-25), as Buzura was placed inside the lepidopteran genus Biston. As expected, we detected intra-population variability in the virus sample when the novel isolate was compared to the Chinese isolates: 292 single nucleotide variants were found in the genome, with 181 affecting the protein product. The closest representatives of other species to BisuNPV-CNPSo-25 was found to be Sucra jujuba nucleopolyhedrovirus and Hyposidra talaca nucleopolyhedrovirus, two other virus isolates of geometrid caterpillars. The study of baculovirus genomes is of importance for the development of tools for insect pest biological control and biotechnology.
我们描述了一种新的杆状病毒分离株——Buzura suppressaria 核型多角体病毒(命名为 CNPSo-25)的完整基因组序列。发现其包含的多角体呈多面体形,并含有单嵌入核衣壳的病毒粒子。基因组大小为 121377bp,G+C 含量为 36.7%。我们注释了 131 个 ORF,覆盖了基因组的 90.42%。此外,系统发育推断表明,CNPSo-25 是 Alphabaculovirus 属的成员,与另外两个同物种的中国分离株聚类在一起。我们将该病毒命名为 Biston suppressaria 核型多角体病毒分离株 CNPSo-25(BisuNPV-CNPSo-25),因为 Buzura 被归入鳞翅目昆虫属 Biston 中。正如预期的那样,当将新分离株与中国分离株进行比较时,我们在病毒样本中检测到了种内变异性:在基因组中发现了 292 个单核苷酸变异,其中 181 个影响蛋白质产物。与 BisuNPV-CNPSo-25 最接近的其他物种代表是 Sucra jujuba 核型多角体病毒和 Hyposidra talaca 核型多角体病毒,它们是两种其他夜蛾幼虫的病毒分离株。杆状病毒基因组的研究对于昆虫害虫生物防治和生物技术工具的开发具有重要意义。