Department of Computer Science, School of Computing, Tokyo Institute of Technology, W8-76, 2-12-1, Ookayama Meguro-ku, Tokyo 152-8550, Japan.
Department of Bioscience and Bioinformatics, Kyushu Institute of Technology, Iizuka, Fukuoka 820-8502, Japan.
Molecules. 2021 Jan 7;26(2):271. doi: 10.3390/molecules26020271.
There are two molecular processes that are essential for living bodies to maintain their life: the molecular recognition, and the self-organization or self-assembly. Binding of a substrate by an enzyme is an example of the molecular recognition, while the protein folding is a good example of the self-organization process. The two processes are further governed by the other two physicochemical processes: solvation and the structural fluctuation. In the present article, the studies concerning the two molecular processes carried out by Hirata and his coworkers, based on the statistical mechanics of molecular liquids or the RISM/3D-RISM theory, are reviewed.
分子识别和自组织或自组装。酶与底物的结合就是分子识别的一个例子,而蛋白质折叠则是自组织过程的一个很好的例子。这两个过程进一步受到另外两个物理化学过程的控制:溶剂化和结构涨落。在本文中,回顾了平田及其同事基于分子液体的统计力学或 RISM/3D-RISM 理论进行的这两个分子过程的研究。