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郭炳林和萧(小檗科)的完整叶绿体基因组。

The complete chloroplast genome of B. L. Guo et Hsiao (Berberidaceae).

作者信息

Li Xiaoming, Xu Tianrong, Yao Yu, Yang Qianru, Xu Chaoqun, Suo Fengmei, Zhang Cheng, Shen Guoan, Guo Baolin, Liu Xiang, Wei Shenghua

机构信息

School of Pharmacy, Guizhou University of Traditional Chinese Medicine, Guiyang, China.

Institute of Medicinal Plant Development, Chinese Academy of Medical Science, Peking Union Medical College, Beijing, China.

出版信息

Mitochondrial DNA B Resour. 2020 May 12;5(3):2045-2046. doi: 10.1080/23802359.2020.1730269.

DOI:10.1080/23802359.2020.1730269
PMID:33457736
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7782069/
Abstract

The genus of belongs to Berberidaceae family, which is famous for their medicinal and ornamental value. In recent years, has attracted increasing attention due to their medicinal and nutritive value. In this research, we reported the complete chloroplast (cp) genome of The complete chloroplast of this species is 157,076 bp in length, including a pair of invert repeat regions (IRS) (25,833 bp) that is divided by a large single copy area (LSC) (88,340 bp) and a small single copy area (SSC) (17,070 bp). The circular chloroplast genome of . contains 112 unique genes, composing of 78 protein-coding genes, 30 tRNA, and four rRNA genes. Phylogenetic analysis indicates that . has a closer relationship with .

摘要

该属属于小檗科,以其药用和观赏价值而闻名。近年来,由于其药用和营养价值,该属受到了越来越多的关注。在本研究中,我们报道了该属的完整叶绿体(cp)基因组。该物种的完整叶绿体长度为157,076 bp,包括一对反向重复区域(IRS)(25,833 bp),该区域被一个大单拷贝区域(LSC)(88,340 bp)和一个小单拷贝区域(SSC)(17,070 bp)隔开。该属的环状叶绿体基因组包含112个独特基因,由78个蛋白质编码基因、30个tRNA和4个rRNA基因组成。系统发育分析表明,该属与另一属关系更近。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48d2/7782069/4a0aac14e3ba/TMDN_A_1730269_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48d2/7782069/4a0aac14e3ba/TMDN_A_1730269_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48d2/7782069/4a0aac14e3ba/TMDN_A_1730269_F0001_B.jpg

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Brief Bioinform. 2019 Jul 19;20(4):1160-1166. doi: 10.1093/bib/bbx108.
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GeSeq - versatile and accurate annotation of organelle genomes.GeSeq - 细胞器基因组的多功能和准确注释。
Nucleic Acids Res. 2017 Jul 3;45(W1):W6-W11. doi: 10.1093/nar/gkx391.
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The effects of Chinese yam-epimedium mixture on respiratory function and quality of life in patients with chronic obstructive pulmonary disease.山药-淫羊藿混合物对慢性阻塞性肺疾病患者呼吸功能和生活质量的影响。
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