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一种药用植物(毛茛科)的完整叶绿体基因组。

The complete chloroplast genome of a medicinal plant (Ranunculaceae).

作者信息

Tang Yuwen, Liu Yifei, Liu Man, Hu Zhigang, Huang Bisheng

机构信息

College of Pharmacy, Hubei University of Chinese Medicine, Wuhan, China.

出版信息

Mitochondrial DNA B Resour. 2020 May 13;5(3):2065-2066. doi: 10.1080/23802359.2020.1763869.

DOI:10.1080/23802359.2020.1763869
PMID:33457744
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7781952/
Abstract

has long-term been used in Chinese traditional medicine with the effects of anticancer, anti-inflammatory, antimicrobial properties, and immune regulation. However, the genomic information of this species is limited, which hinders its further medicinal application. In the present study, the complete chloroplast genome of was sequenced and assembled. The genome size was 157,614 bp in length, consisting of a pair of inverted repeat regions (IR, 31,184 bp), a large single copy (LSC, 79,055 bp), and a small single copy (SSC, 16,191 bp). A total of 138 genes were annotated, including 90 protein-coding genes, 40 tRNA genes, and eight rRNA genes. The GC content of the genome was 37.74%. A phylogenetic analysis on the basis of the whole chloroplast genome sequences further suggested a close relationship between , , and . Collectively, the chloroplast genome provided new genomic resources which will improve its research and application in the future.

摘要

长期以来一直被用于中药,具有抗癌、抗炎、抗菌特性和免疫调节作用。然而,该物种的基因组信息有限,这阻碍了其进一步的药用应用。在本研究中,对[物种名称]的完整叶绿体基因组进行了测序和组装。基因组长度为157,614 bp,由一对反向重复区域(IR,31,184 bp)、一个大单拷贝(LSC,79,055 bp)和一个小单拷贝(SSC,16,191 bp)组成。共注释了138个基因,包括90个蛋白质编码基因、40个tRNA基因和8个rRNA基因。基因组的GC含量为37.74%。基于整个叶绿体基因组序列的系统发育分析进一步表明[物种名称]、[物种名称]和[物种名称]之间关系密切。总体而言,[物种名称]叶绿体基因组提供了新的基因组资源,这将在未来改善其研究和应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/071d/7781952/b49a8cff8ddb/TMDN_A_1763869_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/071d/7781952/b49a8cff8ddb/TMDN_A_1763869_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/071d/7781952/b49a8cff8ddb/TMDN_A_1763869_F0001_B.jpg

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