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来自白马湖的BMH:线粒体基因组的测序与系统发育分析

BMH from Baima Hu Lake: sequencing and phylogenetic analysis of the mitochondrial genome.

作者信息

Liu Minyan, Yin Junxia, Han Jiwei, Ren Jiangfeng, Yang Shoubao

机构信息

College of Life Sciences, Shaoxing University, Shaoxing, P.R. China.

Chunhui Senior High School, Shangyu, P.R. China.

出版信息

Mitochondrial DNA B Resour. 2020 Jun 11;5(3):2413-2415. doi: 10.1080/23802359.2020.1775144.

DOI:10.1080/23802359.2020.1775144
PMID:33457809
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7782640/
Abstract

Northern snakehead, , is a commercially important food fish species in China. In the present study, the complete mitochondrial genome of from the Baima Hu Lake was characterized. It is 16,558 bp in length, consist of 22 tRNA genes, 13 PCD genes, 2 rRNA genes, and 1 D-loop region. The overall base composition of the mitogenome is 27.26% A, 24.21% T, 31.58% C and 16.95% G, exhibits a similar AT bias (51.47%) feature to other vertebrate mitogenomes. The phylogenetic analysis showed that clustered in genus . The present resultes provide useful information to population genetics and conservation biology studies of fishes.

摘要

乌鳢是中国一种具有重要商业价值的食用鱼类。在本研究中,对采自白马湖的乌鳢的线粒体基因组进行了特征分析。其长度为16,558 bp,由22个tRNA基因、13个PCD基因、2个rRNA基因和1个D-loop区组成。乌鳢线粒体基因组的总体碱基组成为27.26%A、24.21%T、31.58%C和16.95%G,呈现出与其他脊椎动物线粒体基因组相似的AT偏倚(51.47%)特征。系统发育分析表明,乌鳢聚类在鳢属中。本研究结果为乌鳢鱼类的群体遗传学和保护生物学研究提供了有用信息。

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本文引用的文献

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Mitochondrial DNA B Resour. 2019 Oct 23;4(2):3691-3692. doi: 10.1080/23802359.2019.1679681.
2
The complete mitochondrial genome of (Teleostei, Siluriformes).(硬骨鱼纲,鲇形目)的完整线粒体基因组。
Mitochondrial DNA B Resour. 2019 Oct 18;4(2):3626-3627. doi: 10.1080/23802359.2019.1676173.
3
Effects of Dietary Inclusion of Shrimp Paste on Growth Performance, Digestive Enzymes Activities, Antioxidant and Immunological Status and Intestinal Morphology of Hybrid Snakehead ( × ).
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Front Physiol. 2019 Aug 7;10:1027. doi: 10.3389/fphys.2019.01027. eCollection 2019.
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Role of Myeloperoxidase of northern snakehead (Channa argus) in Aeromonas veronii infection.北方蛇头鱼(Channa argus)髓过氧化物酶在维氏气单胞菌感染中的作用。
Microb Pathog. 2019 Oct;135:103622. doi: 10.1016/j.micpath.2019.103622. Epub 2019 Jul 17.
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Fish Shellfish Immunol. 2019 Aug;91:122-129. doi: 10.1016/j.fsi.2019.05.002. Epub 2019 May 2.
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Mar Biotechnol (NY). 2019 Jun;21(3):348-358. doi: 10.1007/s10126-019-09884-z. Epub 2019 Mar 19.
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