鸢尾科卡尼茨属植物的完整叶绿体基因组序列。
The complete chloroplast genome sequences of the kanitz (Iridaceae).
作者信息
Choi Tae-Young, Oh Seung-Hwan, Jang Chang-Gee, Kim Hae-Won, Kim Aleksey, Lee Soo-Rang
机构信息
Forest Biodiversity Division, Korea National Arboretum, Pocheon, Republic of Korea.
Department of Biology Education, Kongju National University, Gongju, Republic of Korea.
出版信息
Mitochondrial DNA B Resour. 2020 Jul 20;5(3):2876-2877. doi: 10.1080/23802359.2020.1790312.
is a perennial rhizomatous herb distributed in Central Asia. We examined genomic architecture of the complete chloroplast genome in by assembling the Illumina MiSeq reads using de novo strategy. The chloroplast genome is 150,940 bp in length harboring 79 protein-coding genes, 30 tRNA genes, and four rRNA genes. It exhibits typical quadripartite structure comprising LSC (80,907 bp), SSC (17,853 bp), and a pair of IRs (26,090 bp). Phylogenetic analysis of 20 chloroplast genomes from Asparagales revealed that Iridaceae is a monophyletic group and the is clustered together with the congener,
是一种分布于中亚的多年生根茎草本植物。我们通过从头组装策略对Illumina MiSeq测序数据进行组装，从而研究了其完整叶绿体基因组的基因组结构。叶绿体基因组长度为150,940 bp，包含79个蛋白质编码基因、30个tRNA基因和4个rRNA基因。它呈现出典型的四分体结构，包括大单拷贝区（80,907 bp）、小单拷贝区（17,853 bp）和一对反向重复序列（26,090 bp）。对天门冬目20个叶绿体基因组的系统发育分析表明，鸢尾科是一个单系类群，且该植物与同属植物聚在一起。
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