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完整的线粒体基因组为十个物种之间的关系提供了当前精确的系统发育基因组学假设。

Complete mitochondrial genomes provide current refined phylogenomic hypotheses for relationships among ten species.

作者信息

Carter Javan K, Innes Peter, Goebl April M, Johnson Benjamin, Gebert Matthew, Attia Ziv, Gabani Zachariah, Li Ruiqi, Melie Tina, Dart Chiara, Mares Ali, Greidanus Chrisopher, Paterson Jaime, Wall Brianna, Cortese Gabriela, Thirouin Kevin, Glime Gabrielle, Rutten Joseph, Poyd Cameron, Post Erin, Wall Brianna, Elhadi Ahmed A, Feldmann Katherine, Danz August, Blanchard Thomas, Amato Samantha, Reinert Stephan, Pogoda Cloe S, Scordato Elizabeth S C, Hund Amanda K, Safran Rebecca J, Kane Nolan C

机构信息

Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, CO, USA.

Department of Biological Science, California State Polytechnic University, Pomona, CA, USA.

出版信息

Mitochondrial DNA B Resour. 2020 Jul 20;5(3):2881-2885. doi: 10.1080/23802359.2020.1790999.

Abstract

is the most species-rich genus of the passerine swallow family (Hirundinidae) and has a cosmopolitan distribution. Here we report the complete, annotated mitochondrial genomes for 25 individuals from 10 of the 14 extant species; these include representatives from four subspecies of the barn swallow, . Mitogenomes were conserved in size, ranging from 18,500 to 18,700 base pairs. They all contained 13 protein-coding regions, 22 tRNAs, a control region, and large and small ribosomal subunits. Phylogenetic analysis resolved most of the relationships between the studied species and subspecies which were largely consistent with previously published trees. Several new relationships were observed within the phylogeny that could have only been discovered with the increased amount of genetic material. This study represents the largest mitochondrial phylogeny to date, and could serve as a vital tool for other studies focusing on the evolution of the genus.

摘要

是雀形目燕科中物种最丰富的属,分布于世界各地。在此,我们报告了现存14个物种中10个物种的25个个体的完整注释线粒体基因组;其中包括家燕四个亚种的代表。线粒体基因组大小保守,范围在18,500至18,700个碱基对之间。它们都包含13个蛋白质编码区、22个tRNA、一个控制区以及大、小核糖体亚基。系统发育分析解析了所研究物种和亚种之间的大部分关系,这些关系在很大程度上与先前发表的树状图一致。在系统发育中观察到了几个新的关系,这些关系只有通过增加遗传物质的量才能发现。这项研究是迄今为止最大规模的线粒体系统发育研究,可为其他关注该属进化的研究提供重要工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad7b/7783031/a0c5385d628d/TMDN_A_1790999_F0001_C.jpg

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