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蝴蝶鲳(鲷形目,金线鱼科)线粒体全基因组特征及系统发育分析

Characterization of the complete mitochondrial genome of the Butterfly whiptail, (Spariformes, Nemipteridae) and phylogenetic analysis.

作者信息

Song Ha Yeun, Jung Yun-Hwan, Choi Young Ji, Kim Bora, Nguyen Tu Van, Lee Dae-Sung

机构信息

Department of Genetic Resources Research, National Marine Biodiversity Institute of Korea, Seocheon-gun, Republic of Korea.

International Center for Marine Biodiversity, National Marine Biodiversity Institute of Korea, Seocheon-gun, Republic of Korea.

出版信息

Mitochondrial DNA B Resour. 2020 Jul 20;5(3):2898-2899. doi: 10.1080/23802359.2020.1791022.

DOI:10.1080/23802359.2020.1791022
PMID:33457993
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7782546/
Abstract

The complete mitochondrial genome of which belongs to the family Nemipteridae was first determined. The complete mitochondrial genome was 16,836 bp in length with 37 genes, including 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and a control region. Phylogenetic analysis using mitochondrial genomes of 11 related species revealed that formed a well-supported monophyletic group with the other Nemipteridae species. This mitochondrial genome provides a useful information for resolving the taxonomic issues.

摘要

首次测定了属于金线鱼科鱼类的线粒体全基因组序列。该线粒体全基因组长度为16,836 bp,包含37个基因,其中包括13个蛋白质编码基因、22个tRNA基因、2个rRNA基因和1个控制区。利用11个相关物种的线粒体基因组进行系统发育分析表明,该物种与其他金线鱼科物种形成了一个得到充分支持的单系类群。这个线粒体基因组为解决分类学问题提供了有用的信息。

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本文引用的文献

1
tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes.tRNAscan-SE在线工具:整合搜索与上下文以分析转运RNA基因
Nucleic Acids Res. 2016 Jul 8;44(W1):W54-7. doi: 10.1093/nar/gkw413. Epub 2016 May 12.
2
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.MEGA7:适用于更大数据集的分子进化遗传学分析版本7.0
Mol Biol Evol. 2016 Jul;33(7):1870-4. doi: 10.1093/molbev/msw054. Epub 2016 Mar 22.
3
Phylogenetic placement of enigmatic percomorph families (Teleostei: Percomorphaceae).
神秘鲈形目鱼类家族(硬骨鱼纲:鲈形亚纲)的系统发育定位
Mol Phylogenet Evol. 2016 Jan;94(Pt B):565-576. doi: 10.1016/j.ympev.2015.10.006. Epub 2015 Oct 19.