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天南星科(Araceae)的完整叶绿体基因组。

The complete chloroplast genome of (Araceae).

作者信息

Kim Jinhyuk, Lee Junki, Choi Sunseong, Um Sanghee, Kim Hyojin, Chun Hyang Sook, Nah Gyoungju

机构信息

Genome Analysis Center at National Instrumentation Center for Environmental Management, Seoul National University, Seoul, Korea.

Department of Food Science and Technology, Chung-Ang University, Ahnsung, Korea.

出版信息

Mitochondrial DNA B Resour. 2020 Jul 25;5(3):2994-2995. doi: 10.1080/23802359.2020.1797571.

Abstract

The complete chloroplast genome sequence of , a species of the Araceae family, was characterized from the assembly of HiSeq (Illumina Co.) paired-end sequencing data. The chloroplast genome of was 165,289 bp in length, with a large single-copy (LSC) region of 91,747 bp, a small single-copy (SSC) region of 22,550 bp, and a pair of identical inverted repeat regions (IRs) of 25,496 bp. The genome contained a total of 132 genes, including 86 protein-coding genes, 38 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. The phylogenetic analysis of with 12 related species revealed the closest taxonomical relationship with in the .

摘要

通过对HiSeq(Illumina公司)双端测序数据的组装,对天南星科一种植物的完整叶绿体基因组序列进行了表征。该植物的叶绿体基因组长度为165,289 bp,其中大单拷贝(LSC)区域为91,747 bp,小单拷贝(SSC)区域为22,550 bp,一对相同的反向重复区域(IRs)为25,496 bp。该基因组总共包含132个基因,包括86个蛋白质编码基因、38个转运RNA(tRNA)基因和8个核糖体RNA(rRNA)基因。对该植物与12个相关物种的系统发育分析表明,它与天南星科中的某一物种在分类学上关系最为密切。

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