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(雅克)肖特1829年(泽泻目:天南星科)的完整叶绿体基因组。

The complete chloroplast genome of (Jacq.) Schott 1829 (Alismatales: Araceae).

作者信息

Nah Gyoungju, Jeong Ji Ran, Lee Jae Hwan, Soh Soon Yil, Nam Sang Yong

机构信息

Genome Analysis Center at National Instrumentation Center for Environmental Management, Seoul National University, Seoul, South Korea.

Department of Environmental Horticulture, Sahmyook University, Seoul, South Korea.

出版信息

Mitochondrial DNA B Resour. 2024 Feb 9;9(2):262-266. doi: 10.1080/23802359.2024.2311748. eCollection 2024.

Abstract

(Jacq.) Schott 1829, a species of the Araceae family, is a foliage plant of ornamental value. The complete chloroplast genome sequence of was obtained by the assembly of NovaSeq 6000 (Illumina Co., San Diego, CA) paired-end short reads and Oxford Nanopore long reads. The complete chloroplast genome of was 168,609 bp in length, with a large single-copy (LSC) region of 94,393 bp, a small single-copy (SSC) region of 25,774 bp, and a pair of identical inverted repeat regions (IRs) of 24,221 bp. The genome contained a total of 129 genes, including 85 protein-coding genes, 36 transfer RNA (tRNA) genes, and eight ribosomal RNA (rRNA) genes. The phylogenetic analysis of with 19 related species and two outgroup species revealed the closest taxonomical relationship with in the Araceae family.

摘要

(雅克.) 肖特,1829年,天南星科的一个物种,是一种具有观赏价值的观叶植物。通过对NovaSeq 6000(Illumina公司,加利福尼亚州圣地亚哥)双端短读长和牛津纳米孔长读长进行组装,获得了[植物名称]的完整叶绿体基因组序列。[植物名称]的完整叶绿体基因组长度为168,609 bp,其中大单拷贝(LSC)区域为94,393 bp,小单拷贝(SSC)区域为25,774 bp,一对相同的反向重复区域(IRs)为24,221 bp。该基因组共包含129个基因,包括85个蛋白质编码基因、36个转移RNA(tRNA)基因和8个核糖体RNA(rRNA)基因。对[植物名称]与19个相关物种和两个外类群物种进行的系统发育分析表明,它与天南星科中的[另一植物名称]具有最密切的分类关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfab/10860476/c38493ec8778/TMDN_A_2311748_F0001_C.jpg

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