Lee Junki, Kim Yoojin, Chun Hyang Sook, Kwon Kisung, Koh Youngho, Kang Tae Sun, Kang Jung-Hwa, Kim Eun-Jeong, Nah Gyoungju
Genome Analysis Center at National Instrumentation Center for Environmental Management, Seoul National University, Seoul, Republic of Korea.
Department of Food Science and Technology, Chung-Ang University, Ahnsung, Republic of Korea.
Mitochondrial DNA B Resour. 2018 Oct 3;3(2):1090-1091. doi: 10.1080/23802359.2018.1508383.
The complete chloroplast genome sequence of , a species of the family, was characterized from the assembly of HiSeq (Illumina Co.) paired-end sequencing data. The chloroplast genome of was 155,292 bp in length, with a large single-copy (LSC) region of 84,120 bp, a small single-copy (SSC) region of 18,342 bp, and a pair of identical inverted repeat regions (IRs) of 26,415 bp. The genome contained a total of 114 genes, including 80 protein-coding genes, 30 transfer RNA (tRNA) genes, and 4 ribosomal RNA (rRNA) genes. The phylogenetic analysis of with 14 related species revealed the closest taxonomical relationship with in the family.
通过对HiSeq(Illumina公司)双端测序数据的组装,对某科某一物种的完整叶绿体基因组序列进行了特征分析。该物种的叶绿体基因组长度为155,292 bp,其中大单拷贝(LSC)区域为84,120 bp,小单拷贝(SSC)区域为18,342 bp,一对相同的反向重复区域(IRs)为26,415 bp。该基因组共包含114个基因,包括80个蛋白质编码基因、30个转运RNA(tRNA)基因和4个核糖体RNA(rRNA)基因。对该物种与14个相关物种的系统发育分析表明,它与该科中的某一物种具有最密切的分类关系。