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(鲉形目:鲉科)的线粒体全基因组序列及系统发育分析

The complete mitochondrial genome sequence and phylogenetic analysis for (Scorpaeniformes: Synanceiidae).

作者信息

Kim Hyo-Won, Kim Jung-Hyun, Kim Jae Hoon, Jeong Min-Hwan, Ji Seung-Cheol, Kim Moo-Sang, Myeong Jeong-In, Kim Dae-Jung

机构信息

Jeju Fisheries Research Institute, National Institute of Fisheries Science, Jeju, Republic of Korea.

MOAGEN, Daejeon, Republic of Korea.

出版信息

Mitochondrial DNA B Resour. 2020 Aug 7;5(3):3141-3142. doi: 10.1080/23802359.2020.1800424.

Abstract

The complete mitochondrial genome (mitogenome) of the was analyzed by next-generation sequencing in this study. The mitogenome is 16,978 base pairs (bp) long and codes for 22 transfer RNA (tRNA) genes, 13 protein-coding genes (PCGs), 2 ribosomal RNA genes (rRNA), and 1 non-coding control region. The overall nucleotide composition of the mitogenome is: 29.61% for A, 29.16% for T, 25.26% for C, and 15.97% for G. Twenty-two tRNAs range from 67 to 74 bp in length, and 2 rRNA (12S and 16S) were 953 and 1,687 bp long, respectively. Phylogenetic analysis by neighbor-joining (NJ) method indicated that showed considerable genetic similarity (82%), and had a closer relationship in the phylogenetic tree to .

摘要

在本研究中,通过下一代测序分析了[物种名称]的完整线粒体基因组(线粒体基因组)。该线粒体基因组长度为16,978个碱基对(bp),编码22个转运RNA(tRNA)基因、13个蛋白质编码基因(PCG)、2个核糖体RNA基因(rRNA)和1个非编码控制区。线粒体基因组的总体核苷酸组成是:A占29.61%,T占29.16%,C占25.26%,G占15.97%。22个tRNA的长度在67至74 bp之间,2个rRNA(12S和16S)分别长953和1,687 bp。通过邻接法(NJ)进行的系统发育分析表明,[物种名称]显示出相当高的遗传相似性(82%),并且在系统发育树中与[另一物种名称]的关系更密切。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5bb2/7781928/2bdb7b3aba66/TMDN_A_1800424_F0001_B.jpg

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