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(石蒜科)的完整叶绿体基因组。

The complete chloroplast genome of (Amaryllidaceae).

作者信息

Li Peiling, Ren Maofei, Zhu Qingsong, Zhang Yan, Xu Hanbing, Wang Zhiyong, Liu Songhu, Cheng Qin, Liang Benguo

机构信息

College of Horticulture, Xinyang Agricultural and Forestry University, Xinyang, China.

Henan Key Laboratory of Tea Comprehensive Utilization in South Henan, Xinyang Agriculture and Forestry University, Xinyang, China.

出版信息

Mitochondrial DNA B Resour. 2020 Oct 9;5(3):3521-3523. doi: 10.1080/23802359.2020.1827059.

Abstract

(L'Hér.) Herb. is a perennial herb in the Amaryllidaceae, which has been used as a medicinal and ornamental plant. Here, we assembled and characterized the complete chloroplast (cp) genome of by high throughput sequencing. As a result, the length of the complete cp genome is 158,082 bp with a canonical quadripartite structure, consists of a large single-copy region (LSC) of 86,165 bp, a small single-copy region (SSC) of 18,283 bp, and two inverted repeat (IR) regions of 26,817 bp, each. A total of 137 genes were identified, including 87 protein-coding genes, 42 tRNA genes, and 8 rRNA genes. The phylogenomic analysis was performed based on the complete cp genomes of 30 species, which revealed the closest relationship between and in the genus

摘要

(赫氏)草本植物是石蒜科的一种多年生草本植物,已被用作药用和观赏植物。在此,我们通过高通量测序组装并表征了其完整的叶绿体(cp)基因组。结果,完整的cp基因组长度为158,082 bp,具有典型的四分体结构,由一个86,165 bp的大单拷贝区域(LSC)、一个18,283 bp的小单拷贝区域(SSC)和两个各为26,817 bp的反向重复(IR)区域组成。共鉴定出137个基因,包括87个蛋白质编码基因、42个tRNA基因和8个rRNA基因。基于30个物种的完整cp基因组进行了系统发育基因组分析,结果显示该植物与该属中的另一种植物关系最为密切 。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/acf4/7781927/7459c3d1681e/TMDN_A_1827059_F0001_B.jpg

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